Carnation DB

Dca6892.1

Annotation

5-exons
f-1
sp|F6GSZ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g07330#GO:0003676#1F0P0C
AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protein 3 | chr5:24560870-24562152 FORWARD LENGTH=309
Repeat List (scaffold1274)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6892.1	20	143	267	31.83	124	69	3e-45
Target_name	Start	End	Length	Cov(%)
sp\|F6GSZ1_VITVI	1	120	277	43.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6892.1	20	143	267	28.46	124	62	6e-43
Target_name	Start	End	Length	Cov(%)
AT5G61030.1	1	120	309	38.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1274	Augustus	mRNA	45163	47422	.	-	.	ID=Dca6892.1;Parent=Dca6892
scaffold1274	Augustus	exon	45163	45585	.	-	.	ID=Dca6892.1.exon1;Parent=Dca6892.1
scaffold1274	Augustus	exon	45936	46042	.	-	.	ID=Dca6892.1.exon2;Parent=Dca6892.1
scaffold1274	Augustus	exon	46984	47052	.	-	.	ID=Dca6892.1.exon3;Parent=Dca6892.1
scaffold1274	Augustus	exon	47137	47302	.	-	.	ID=Dca6892.1.exon4;Parent=Dca6892.1
scaffold1274	Augustus	exon	47384	47422	.	-	.	ID=Dca6892.1.exon5;Parent=Dca6892.1