Carnation DB

Dca7144.1

Annotation

5-exons
f-1
sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1288)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7144.1	285	834	835	40.59	550	56	0
Target_name	Start	End	Length	Cov(%)
sp\|Q6L3N8_SOLDE	720	1325	1333	45.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7144.1	229	829	835	31.49	601	38	7e-127
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	706	1389	1401	48.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1288	Augustus	mRNA	28001	33898	.	+	.	ID=Dca7144.1;Parent=Dca7144
scaffold1288	Augustus	exon	28001	28267	.	+	.	ID=Dca7144.1.exon1;Parent=Dca7144.1
scaffold1288	Augustus	exon	28380	28579	.	+	.	ID=Dca7144.1.exon2;Parent=Dca7144.1
scaffold1288	Augustus	exon	28863	29249	.	+	.	ID=Dca7144.1.exon3;Parent=Dca7144.1
scaffold1288	Augustus	exon	32116	32850	.	+	.	ID=Dca7144.1.exon4;Parent=Dca7144.1
scaffold1288	Augustus	exon	32980	33898	.	+	.	ID=Dca7144.1.exon5;Parent=Dca7144.1