Carnation DB

Dca7192.1

Annotation

5-exons
f-1
sp|B9HDP3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561678#unknown#0F0P0C
Repeat List (scaffold129)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7192.1	1	442	463	33.9	442	34	5e-70
Target_name	Start	End	Length	Cov(%)
sp\|B9HDP3_POPTR	41	489	528	85.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7192.1	1	453	463	31.74	453	32	1e-50
Target_name	Start	End	Length	Cov(%)
AT5G11780.1	45	485	504	87.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold129	Augustus	mRNA	120290	122693	.	-	.	ID=Dca7192.1;Parent=Dca7192
scaffold129	Augustus	exon	120290	120660	.	-	.	ID=Dca7192.1.exon1;Parent=Dca7192.1
scaffold129	Augustus	exon	120765	120916	.	-	.	ID=Dca7192.1.exon2;Parent=Dca7192.1
scaffold129	Augustus	exon	121017	121183	.	-	.	ID=Dca7192.1.exon3;Parent=Dca7192.1
scaffold129	Augustus	exon	121330	121382	.	-	.	ID=Dca7192.1.exon4;Parent=Dca7192.1
scaffold129	Augustus	exon	122045	122693	.	-	.	ID=Dca7192.1.exon5;Parent=Dca7192.1