Carnation DB

Dca7379.1

Annotation

11-exons
f-1
sp|B9H438_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_800697#unknown#0F0P0C
AT5G08450.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). | chr5:2727970-2732572 REVERSE LENGTH=918
Repeat List (scaffold13)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7379.1	1	779	779	60.33	779	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H438_POPTR	1	779	779	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7379.1	47	779	779	57.38	733	54	0
Target_name	Start	End	Length	Cov(%)
AT5G08450.1	106	918	918	88.56

seqname	source	feature	start	end	score	strand	frame	group
scaffold13	Augustus	mRNA	128530	134268	.	-	.	ID=Dca7379.1;Parent=Dca7379
scaffold13	Augustus	exon	128530	128640	.	-	.	ID=Dca7379.1.exon1;Parent=Dca7379.1
scaffold13	Augustus	exon	128933	129167	.	-	.	ID=Dca7379.1.exon2;Parent=Dca7379.1
scaffold13	Augustus	exon	129376	129486	.	-	.	ID=Dca7379.1.exon3;Parent=Dca7379.1
scaffold13	Augustus	exon	129703	129770	.	-	.	ID=Dca7379.1.exon4;Parent=Dca7379.1
scaffold13	Augustus	exon	130117	130230	.	-	.	ID=Dca7379.1.exon5;Parent=Dca7379.1
scaffold13	Augustus	exon	130731	130825	.	-	.	ID=Dca7379.1.exon6;Parent=Dca7379.1
scaffold13	Augustus	exon	131309	131374	.	-	.	ID=Dca7379.1.exon7;Parent=Dca7379.1
scaffold13	Augustus	exon	131466	131553	.	-	.	ID=Dca7379.1.exon8;Parent=Dca7379.1
scaffold13	Augustus	exon	131935	132107	.	-	.	ID=Dca7379.1.exon9;Parent=Dca7379.1
scaffold13	Augustus	exon	132389	132396	.	-	.	ID=Dca7379.1.exon10;Parent=Dca7379.1
scaffold13	Augustus	exon	132998	134268	.	-	.	ID=Dca7379.1.exon11;Parent=Dca7379.1