Carnation DB

Dca7386.1

Annotation

7-exons
f-1
sp|B9IP24_POPTR#Calcium dependent protein kinase 12#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CPK12#GO:0005524;GO:0005509;GO:0004674#3F0P0C
Repeat List (scaffold13)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7386.1	17	487	493	73.83	471	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IP24_POPTR	22	492	503	93.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca7386.1	13	481	493	69.57	469	73	0
Target_name	Start	End	Length	Cov(%)
Os11t0171500-01	31	500	514	91.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13	Augus-PASA	mRNA	183251	186014	.	-	.	ID=Dca7386.1;Parent=Dca7386
scaffold13	Augus-PASA	exon	183251	183376	.	-	.	ID=Dca7386.1.exon1;Parent=Dca7386.1
scaffold13	Augus-PASA	exon	183508	183732	.	-	.	ID=Dca7386.1.exon2;Parent=Dca7386.1
scaffold13	Augus-PASA	exon	183819	183986	.	-	.	ID=Dca7386.1.exon3;Parent=Dca7386.1
scaffold13	Augus-PASA	exon	184199	184314	.	-	.	ID=Dca7386.1.exon4;Parent=Dca7386.1
scaffold13	Augus-PASA	exon	184395	184547	.	-	.	ID=Dca7386.1.exon5;Parent=Dca7386.1
scaffold13	Augus-PASA	exon	184909	185052	.	-	.	ID=Dca7386.1.exon6;Parent=Dca7386.1
scaffold13	Augus-PASA	exon	185465	186014	.	-	.	ID=Dca7386.1.exon7;Parent=Dca7386.1