Dca7532.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold13039)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7532.1 |
1 |
375 |
377 |
67.63 |
375 |
59 |
1e-147
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
880 |
1313 |
1313 |
33.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7532.1 |
2 |
371 |
377 |
35.01 |
370 |
32 |
1e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1002 |
1420 |
1428 |
29.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13039 |
Augustus |
mRNA |
4505 |
5814 |
. |
+ |
. |
ID=Dca7532.1;Parent=Dca7532 |
| scaffold13039 |
Augustus |
exon |
4505 |
5045 |
. |
+ |
. |
ID=Dca7532.1.exon1;Parent=Dca7532.1 |
| scaffold13039 |
Augustus |
exon |
5150 |
5413 |
. |
+ |
. |
ID=Dca7532.1.exon2;Parent=Dca7532.1 |
| scaffold13039 |
Augustus |
exon |
5486 |
5814 |
. |
+ |
. |
ID=Dca7532.1.exon3;Parent=Dca7532.1 |
