Dca7769.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold13167)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7769.1 |
132 |
379 |
380 |
39.21 |
248 |
61 |
3e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
18 |
265 |
964 |
25.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7769.1 |
177 |
380 |
380 |
21.84 |
204 |
40 |
4e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
469 |
680 |
1428 |
14.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13167 |
Augustus |
mRNA |
7443 |
9127 |
. |
+ |
. |
ID=Dca7769.1;Parent=Dca7769 |
| scaffold13167 |
Augustus |
exon |
7443 |
7673 |
. |
+ |
. |
ID=Dca7769.1.exon1;Parent=Dca7769.1 |
| scaffold13167 |
Augustus |
exon |
7975 |
8172 |
. |
+ |
. |
ID=Dca7769.1.exon2;Parent=Dca7769.1 |
| scaffold13167 |
Augustus |
exon |
8414 |
9127 |
. |
+ |
. |
ID=Dca7769.1.exon3;Parent=Dca7769.1 |
