Dca7888.1
Annotation
- 2-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1323)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7888.1 |
2 |
493 |
591 |
28.76 |
492 |
31 |
3e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
801 |
1346 |
1449 |
37.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7888.1 |
2 |
280 |
591 |
16.24 |
279 |
35 |
2e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
291 |
563 |
857 |
31.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1323 |
Augustus |
mRNA |
44811 |
47056 |
. |
+ |
. |
ID=Dca7888.1;Parent=Dca7888 |
| scaffold1323 |
Augustus |
exon |
44811 |
45653 |
. |
+ |
. |
ID=Dca7888.1.exon1;Parent=Dca7888.1 |
| scaffold1323 |
Augustus |
exon |
46124 |
47056 |
. |
+ |
. |
ID=Dca7888.1.exon2;Parent=Dca7888.1 |
