Dca819.1
Annotation
- 3-exons
- f-1
- sp|B9N189_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_597628#unknown#0F0P0C
- Repeat List (scaffold1020)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca819.1 |
7 |
241 |
387 |
20.41 |
235 |
32 |
9e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N189_POPTR |
231 |
463 |
511 |
45.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca819.1 |
7 |
155 |
387 |
14.47 |
149 |
36 |
5e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G17930.1 |
198 |
349 |
478 |
31.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1020 |
Augustus |
mRNA |
34749 |
36545 |
. |
+ |
. |
ID=Dca819.1;Parent=Dca819 |
| scaffold1020 |
Augustus |
exon |
34749 |
35456 |
. |
+ |
. |
ID=Dca819.1.exon1;Parent=Dca819.1 |
| scaffold1020 |
Augustus |
exon |
35549 |
35714 |
. |
+ |
. |
ID=Dca819.1.exon2;Parent=Dca819.1 |
| scaffold1020 |
Augustus |
exon |
36256 |
36545 |
. |
+ |
. |
ID=Dca819.1.exon3;Parent=Dca819.1 |
