Dca8217.1
Annotation
- 3-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1342)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8217.1 |
184 |
269 |
276 |
19.92 |
86 |
64 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
1247 |
1332 |
1333 |
6.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8217.1 |
164 |
266 |
276 |
13.4 |
103 |
36 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1332 |
1425 |
1428 |
6.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1342 |
Augustus |
mRNA |
3051 |
4559 |
. |
+ |
. |
ID=Dca8217.1;Parent=Dca8217 |
| scaffold1342 |
Augustus |
exon |
3051 |
3453 |
. |
+ |
. |
ID=Dca8217.1.exon1;Parent=Dca8217.1 |
| scaffold1342 |
Augustus |
exon |
3580 |
3722 |
. |
+ |
. |
ID=Dca8217.1.exon2;Parent=Dca8217.1 |
| scaffold1342 |
Augustus |
exon |
4275 |
4559 |
. |
+ |
. |
ID=Dca8217.1.exon3;Parent=Dca8217.1 |
