Carnation DB

Dca8313.1

Annotation

12-exons
f-1
sp|D7STF3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0055g01130#GO:0003824#1F0P0C
AT4G33500.1 | Symbols: | Protein phosphatase 2C family protein | chr4:16112835-16116243 REVERSE LENGTH=724
Repeat List (scaffold13481)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8313.1	449	697	697	20.08	249	56	4e-71
Target_name	Start	End	Length	Cov(%)
sp\|D7STF3_VITVI	520	769	772	32.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8313.1	448	697	697	18.5	250	52	1e-70
Target_name	Start	End	Length	Cov(%)
AT4G33500.1	471	720	724	34.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold13481	Augustus	mRNA	6014	11393	.	+	.	ID=Dca8313.1;Parent=Dca8313
scaffold13481	Augustus	exon	6014	6185	.	+	.	ID=Dca8313.1.exon1;Parent=Dca8313.1
scaffold13481	Augustus	exon	6279	7056	.	+	.	ID=Dca8313.1.exon2;Parent=Dca8313.1
scaffold13481	Augustus	exon	7177	7276	.	+	.	ID=Dca8313.1.exon3;Parent=Dca8313.1
scaffold13481	Augustus	exon	7441	7577	.	+	.	ID=Dca8313.1.exon4;Parent=Dca8313.1
scaffold13481	Augustus	exon	7957	8011	.	+	.	ID=Dca8313.1.exon5;Parent=Dca8313.1
scaffold13481	Augustus	exon	8420	8520	.	+	.	ID=Dca8313.1.exon6;Parent=Dca8313.1
scaffold13481	Augustus	exon	8780	8846	.	+	.	ID=Dca8313.1.exon7;Parent=Dca8313.1
scaffold13481	Augustus	exon	9623	9707	.	+	.	ID=Dca8313.1.exon8;Parent=Dca8313.1
scaffold13481	Augustus	exon	9935	10104	.	+	.	ID=Dca8313.1.exon9;Parent=Dca8313.1
scaffold13481	Augustus	exon	10419	10562	.	+	.	ID=Dca8313.1.exon10;Parent=Dca8313.1
scaffold13481	Augustus	exon	10762	10890	.	+	.	ID=Dca8313.1.exon11;Parent=Dca8313.1
scaffold13481	Augustus	exon	11238	11393	.	+	.	ID=Dca8313.1.exon12;Parent=Dca8313.1