Dca839.1
Annotation
- 3-exons
- f-1
- sp|A5BKB9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_003621#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold10208)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca839.1 |
167 |
255 |
255 |
24.31 |
89 |
70 |
4e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BKB9_VITVI |
982 |
1070 |
1180 |
7.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca839.1 |
170 |
255 |
255 |
13.72 |
86 |
41 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1213 |
1299 |
1428 |
6.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10208 |
Augustus |
mRNA |
5570 |
8315 |
. |
+ |
. |
ID=Dca839.1;Parent=Dca839 |
| scaffold10208 |
Augustus |
exon |
5570 |
5600 |
. |
+ |
. |
ID=Dca839.1.exon1;Parent=Dca839.1 |
| scaffold10208 |
Augustus |
exon |
5705 |
6194 |
. |
+ |
. |
ID=Dca839.1.exon2;Parent=Dca839.1 |
| scaffold10208 |
Augustus |
exon |
8069 |
8315 |
. |
+ |
. |
ID=Dca839.1.exon3;Parent=Dca839.1 |
