Carnation DB

Dca843.1

Annotation

5-exons
f-1
sp|A5AWU5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001274#unknown#0F0P0C
sp|Q5NRP3_SOLDE#Gag-pol polyprotein, putative#Solanum demissum (Wild potato)#ORFNames=SDM1_58t00005#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold1021)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca843.1	169	408	418	23.92	240	33	1e-29
Target_name	Start	End	Length	Cov(%)
sp\|A5AWU5_VITVI	321	622	786	38.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca843.1	289	405	418	12.2	117	44	5e-26
Target_name	Start	End	Length	Cov(%)
Os11t0256400-01	1	117	365	32.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1021	Augustus	mRNA	43032	45402	.	-	.	ID=Dca843.1;Parent=Dca843
scaffold1021	Augustus	exon	43032	43064	.	-	.	ID=Dca843.1.exon1;Parent=Dca843.1
scaffold1021	Augustus	exon	43168	43531	.	-	.	ID=Dca843.1.exon2;Parent=Dca843.1
scaffold1021	Augustus	exon	43850	44059	.	-	.	ID=Dca843.1.exon3;Parent=Dca843.1
scaffold1021	Augustus	exon	44661	45141	.	-	.	ID=Dca843.1.exon4;Parent=Dca843.1
scaffold1021	Augustus	exon	45234	45402	.	-	.	ID=Dca843.1.exon5;Parent=Dca843.1