Carnation DB

Dca850.1

Annotation

6-exons
f-1
sp|F6HDS8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g03870#GO:0005524;GO:0004674#2F0P0C
sp|B9RTM1_RICCO#Protein kinase atmrk1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0911460#GO:0005524;GO:0004715;GO:0004674#3F0P0C
Repeat List (scaffold10212)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca850.1	6	386	386	70.46	381	72	4e-165
Target_name	Start	End	Length	Cov(%)
sp\|F6HDS8_VITVI	12	391	391	97.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca850.1	28	386	386	67.09	359	72	1e-159
Target_name	Start	End	Length	Cov(%)
AT3G22750.1	22	378	378	94.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10212	Augus-PASA	mRNA	2421	6931	.	-	.	ID=Dca850.1;Parent=Dca850
scaffold10212	Augus-PASA	exon	2421	2627	.	-	.	ID=Dca850.1.exon1;Parent=Dca850.1
scaffold10212	Augus-PASA	exon	4760	4894	.	-	.	ID=Dca850.1.exon2;Parent=Dca850.1
scaffold10212	Augus-PASA	exon	5235	5409	.	-	.	ID=Dca850.1.exon3;Parent=Dca850.1
scaffold10212	Augus-PASA	exon	5515	5723	.	-	.	ID=Dca850.1.exon4;Parent=Dca850.1
scaffold10212	Augus-PASA	exon	5927	6048	.	-	.	ID=Dca850.1.exon5;Parent=Dca850.1
scaffold10212	Augus-PASA	exon	6619	6931	.	-	.	ID=Dca850.1.exon6;Parent=Dca850.1