Carnation DB

Dca856.1

Annotation

5-exons
f-1
sp|E7BTN2_VITVI#Pectate lyase-like protein 1#Vitis vinifera (Grape)#unknown#GO:0016829#1F0P0C
Repeat List (scaffold1022)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca856.1	39	494	500	60	456	65	3e-178
Target_name	Start	End	Length	Cov(%)
sp\|E7BTN2_VITVI	26	483	496	92.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca856.1	41	457	500	56.59	417	68	2e-163
Target_name	Start	End	Length	Cov(%)
AT3G53190.1	31	443	483	85.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1022	Augustus	mRNA	2354	4227	.	+	.	ID=Dca856.1;Parent=Dca856
scaffold1022	Augustus	exon	2354	2529	.	+	.	ID=Dca856.1.exon1;Parent=Dca856.1
scaffold1022	Augustus	exon	2613	3324	.	+	.	ID=Dca856.1.exon2;Parent=Dca856.1
scaffold1022	Augustus	exon	3418	3609	.	+	.	ID=Dca856.1.exon3;Parent=Dca856.1
scaffold1022	Augustus	exon	3700	3905	.	+	.	ID=Dca856.1.exon4;Parent=Dca856.1
scaffold1022	Augustus	exon	4011	4227	.	+	.	ID=Dca856.1.exon5;Parent=Dca856.1