Carnation DB

Dca8706.1

Annotation

7-exons
f-1
sp|B9I2L7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_823289#unknown#0F0P0C
AT1G73840.1 | Symbols: ESP1 | hydroxyproline-rich glycoprotein family protein | chr1:27763937-27766328 REVERSE LENGTH=388
Repeat List (scaffold137)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8706.1	1	376	376	48.67	376	46	5e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9I2L7_POPTR	1	396	396	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8706.1	1	376	376	43.35	376	41	2e-35
Target_name	Start	End	Length	Cov(%)
AT1G73840.1	1	388	388	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold137	Augustus	mRNA	227477	231470	.	+	.	ID=Dca8706.1;Parent=Dca8706
scaffold137	Augustus	exon	227477	227558	.	+	.	ID=Dca8706.1.exon1;Parent=Dca8706.1
scaffold137	Augustus	exon	228020	228078	.	+	.	ID=Dca8706.1.exon2;Parent=Dca8706.1
scaffold137	Augustus	exon	229155	229193	.	+	.	ID=Dca8706.1.exon3;Parent=Dca8706.1
scaffold137	Augustus	exon	229272	229814	.	+	.	ID=Dca8706.1.exon4;Parent=Dca8706.1
scaffold137	Augustus	exon	229917	230006	.	+	.	ID=Dca8706.1.exon5;Parent=Dca8706.1
scaffold137	Augustus	exon	231055	231246	.	+	.	ID=Dca8706.1.exon6;Parent=Dca8706.1
scaffold137	Augustus	exon	231345	231470	.	+	.	ID=Dca8706.1.exon7;Parent=Dca8706.1
scaffold137	Augustus	mRNA	227477	231470	.	+	.	ID=Dca8706.2;Parent=Dca8706
scaffold137	Augustus	exon	227477	227569	.	+	.	ID=Dca8706.2.exon1;Parent=Dca8706.2
scaffold137	Augustus	exon	227712	227789	.	+	.	ID=Dca8706.2.exon2;Parent=Dca8706.2
scaffold137	Augustus	exon	229155	229193	.	+	.	ID=Dca8706.2.exon3;Parent=Dca8706.2
scaffold137	Augustus	exon	229272	229814	.	+	.	ID=Dca8706.2.exon4;Parent=Dca8706.2
scaffold137	Augustus	exon	229917	230006	.	+	.	ID=Dca8706.2.exon5;Parent=Dca8706.2
scaffold137	Augustus	exon	231055	231246	.	+	.	ID=Dca8706.2.exon6;Parent=Dca8706.2
scaffold137	Augustus	exon	231345	231470	.	+	.	ID=Dca8706.2.exon7;Parent=Dca8706.2