Carnation DB

Dca8921.1

Annotation

6-exons
f-1
sp|B9RBF4_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1675250#unknown#0F0P0C
AT2G21710.1 | Symbols: EMB2219 | Mitochondrial transcription termination factor family protein | chr2:9270886-9273307 FORWARD LENGTH=641
Repeat List (scaffold138)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8921.1	16	635	644	58.38	620	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RBF4_RICCO	6	639	643	98.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8921.1	54	638	644	53.72	585	57	0
Target_name	Start	End	Length	Cov(%)
AT2G21710.1	30	630	641	93.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold138	Augus-PASA	mRNA	341735	346863	.	-	.	ID=Dca8921.1;Parent=Dca8921
scaffold138	Augus-PASA	exon	341735	342008	.	-	.	ID=Dca8921.1.exon1;Parent=Dca8921.1
scaffold138	Augus-PASA	exon	343671	343945	.	-	.	ID=Dca8921.1.exon2;Parent=Dca8921.1
scaffold138	Augus-PASA	exon	344286	344393	.	-	.	ID=Dca8921.1.exon3;Parent=Dca8921.1
scaffold138	Augus-PASA	exon	344495	344710	.	-	.	ID=Dca8921.1.exon4;Parent=Dca8921.1
scaffold138	Augus-PASA	exon	345090	345498	.	-	.	ID=Dca8921.1.exon5;Parent=Dca8921.1
scaffold138	Augus-PASA	exon	346211	346863	.	-	.	ID=Dca8921.1.exon6;Parent=Dca8921.1