Carnation DB

Dca8940.1

Annotation

8-exons
f-1
sp|D7TQK4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01950#GO:0008270#1F0P0C
sp|B9S0M6_RICCO#Protein binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1356420#GO:0008270#1F0P0C
Repeat List (scaffold1380)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8940.1	29	487	500	51.8	459	55	8e-142
Target_name	Start	End	Length	Cov(%)
sp\|D7TQK4_VITVI	27	497	516	91.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca8940.1	48	471	500	44.6	424	50	5e-111
Target_name	Start	End	Length	Cov(%)
AT3G09760.1	48	481	491	88.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1380	Augus-PASA	mRNA	29349	35072	.	-	.	ID=Dca8940.1;Parent=Dca8940
scaffold1380	Augus-PASA	exon	29349	29585	.	-	.	ID=Dca8940.1.exon1;Parent=Dca8940.1
scaffold1380	Augus-PASA	exon	29778	29857	.	-	.	ID=Dca8940.1.exon2;Parent=Dca8940.1
scaffold1380	Augus-PASA	exon	29981	30071	.	-	.	ID=Dca8940.1.exon3;Parent=Dca8940.1
scaffold1380	Augus-PASA	exon	30497	30569	.	-	.	ID=Dca8940.1.exon4;Parent=Dca8940.1
scaffold1380	Augus-PASA	exon	31013	31298	.	-	.	ID=Dca8940.1.exon5;Parent=Dca8940.1
scaffold1380	Augustus	exon	31548	31722	.	-	.	ID=Dca8940.1.exon6;Parent=Dca8940.1
scaffold1380	Augustus	exon	32239	32721	.	-	.	ID=Dca8940.1.exon7;Parent=Dca8940.1
scaffold1380	Augustus	exon	34995	35072	.	-	.	ID=Dca8940.1.exon8;Parent=Dca8940.1