Carnation DB

Dca900.1

Annotation

6-exons
f-1
sp|F6HQW1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g02980#unknown#0F0P0C
Repeat List (scaffold10235)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca900.1	78	167	182	25.82	90	49	2e-15
Target_name	Start	End	Length	Cov(%)
sp\|F6HQW1_VITVI	115	202	231	38.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca900.1	78	163	182	27.47	86	52	8e-14
Target_name	Start	End	Length	Cov(%)
AT5G02770.1	109	195	214	40.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10235	Augustus	mRNA	4232	6523	.	+	.	ID=Dca900.1;Parent=Dca900
scaffold10235	Augustus	exon	4232	4367	.	+	.	ID=Dca900.1.exon1;Parent=Dca900.1
scaffold10235	Augustus	exon	4857	4953	.	+	.	ID=Dca900.1.exon2;Parent=Dca900.1
scaffold10235	Augustus	exon	5851	5922	.	+	.	ID=Dca900.1.exon3;Parent=Dca900.1
scaffold10235	Augustus	exon	6030	6173	.	+	.	ID=Dca900.1.exon4;Parent=Dca900.1
scaffold10235	Augustus	exon	6332	6392	.	+	.	ID=Dca900.1.exon5;Parent=Dca900.1
scaffold10235	Augustus	exon	6485	6523	.	+	.	ID=Dca900.1.exon6;Parent=Dca900.1