Carnation DB

Dca9199.1

Annotation

6-exons
f-1
sp|F8WLB4_CITUN#Mechanosensitive ion channel domain-containing protein#Citrus unshiu (Satsuma mandarin) (Citrus nobilis var unshiu)#Name=ORF47#GO:0016020;GO:0055085#0F1P1C
Repeat List (scaffold1394)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9199.1	1	443	450	54.22	443	55	2e-131
Target_name	Start	End	Length	Cov(%)
sp\|F8WLB4_CITUN	259	683	694	61.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9199.1	1	442	450	50.22	442	51	1e-124
Target_name	Start	End	Length	Cov(%)
AT5G12080.1	305	731	734	58.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1394	Augustus	mRNA	20367	22407	.	-	.	ID=Dca9199.1;Parent=Dca9199
scaffold1394	Augustus	exon	20367	20622	.	-	.	ID=Dca9199.1.exon1;Parent=Dca9199.1
scaffold1394	Augustus	exon	20759	20961	.	-	.	ID=Dca9199.1.exon2;Parent=Dca9199.1
scaffold1394	Augustus	exon	21051	21344	.	-	.	ID=Dca9199.1.exon3;Parent=Dca9199.1
scaffold1394	Augustus	exon	21439	21486	.	-	.	ID=Dca9199.1.exon4;Parent=Dca9199.1
scaffold1394	Augustus	exon	21745	21865	.	-	.	ID=Dca9199.1.exon5;Parent=Dca9199.1
scaffold1394	Augustus	exon	21977	22407	.	-	.	ID=Dca9199.1.exon6;Parent=Dca9199.1