Carnation DB

Dca925.1

Annotation

5-exons
f-1
sp|B9GLE8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_814770#GO:0004045#1F0P0C
Os01t0693900-02 Peptidyl-tRNA hydrolase family protein.
Repeat List (scaffold1025)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca925.1	57	108	127	33.85	52	83	2e-19
Target_name	Start	End	Length	Cov(%)
sp\|B9GLE8_POPTR	135	186	222	23.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca925.1	57	108	127	31.49	52	77	3e-19
Target_name	Start	End	Length	Cov(%)
AT5G19830.1	131	182	219	23.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1025	Augustus	mRNA	12612	15763	.	+	.	ID=Dca925.1;Parent=Dca925
scaffold1025	Augustus	exon	12612	12629	.	+	.	ID=Dca925.1.exon1;Parent=Dca925.1
scaffold1025	Augustus	exon	13430	13578	.	+	.	ID=Dca925.1.exon2;Parent=Dca925.1
scaffold1025	Augustus	exon	14916	14974	.	+	.	ID=Dca925.1.exon3;Parent=Dca925.1
scaffold1025	Augustus	exon	15071	15147	.	+	.	ID=Dca925.1.exon4;Parent=Dca925.1
scaffold1025	Augustus	exon	15683	15763	.	+	.	ID=Dca925.1.exon5;Parent=Dca925.1