Dca9376.1
Annotation
- 2-exons
- f-1
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold140)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9376.1 |
2 |
261 |
262 |
64.88 |
260 |
59 |
3e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R2I1_ORYSJ |
773 |
1062 |
1064 |
27.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9376.1 |
16 |
142 |
262 |
26.33 |
127 |
52 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00810.1 |
2 |
134 |
240 |
55.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold140 |
Augustus |
mRNA |
152135 |
153147 |
. |
- |
. |
ID=Dca9376.1;Parent=Dca9376 |
| scaffold140 |
Augustus |
exon |
152135 |
152509 |
. |
- |
. |
ID=Dca9376.1.exon1;Parent=Dca9376.1 |
| scaffold140 |
Augustus |
exon |
152734 |
153147 |
. |
- |
. |
ID=Dca9376.1.exon2;Parent=Dca9376.1 |
