Carnation DB

Dca9564.1

Annotation

8-exons
f-1
sp|A5BHH4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g05020#GO:0016592;GO:0001104#1F0P1C
AT5G20170.1 | Symbols: | RNA polymerase II transcription mediators | chr5:6807554-6810729 REVERSE LENGTH=653
Repeat List (scaffold141)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9564.1	7	650	650	59.38	644	59	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BHH4_VITVI	5	660	660	99.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9564.1	5	649	650	51.69	645	51	0
Target_name	Start	End	Length	Cov(%)
AT5G20170.1	3	648	653	98.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold141	Augustus	mRNA	107477	111937	.	+	.	ID=Dca9564.1;Parent=Dca9564
scaffold141	Augustus	exon	107477	107571	.	+	.	ID=Dca9564.1.exon1;Parent=Dca9564.1
scaffold141	Augustus	exon	108411	108600	.	+	.	ID=Dca9564.1.exon2;Parent=Dca9564.1
scaffold141	Augustus	exon	109025	109138	.	+	.	ID=Dca9564.1.exon3;Parent=Dca9564.1
scaffold141	Augustus	exon	109247	109332	.	+	.	ID=Dca9564.1.exon4;Parent=Dca9564.1
scaffold141	Augustus	exon	109944	110328	.	+	.	ID=Dca9564.1.exon5;Parent=Dca9564.1
scaffold141	Augustus	exon	110424	110867	.	+	.	ID=Dca9564.1.exon6;Parent=Dca9564.1
scaffold141	Augustus	exon	110961	111272	.	+	.	ID=Dca9564.1.exon7;Parent=Dca9564.1
scaffold141	Augustus	exon	111611	111937	.	+	.	ID=Dca9564.1.exon8;Parent=Dca9564.1