Carnation DB

Dca9637.1

Annotation

9-exons
f-1
sp|B9IEM0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_575111#GO:0016020;GO:0005509;GO:0004571#2F0P1C
AT1G27520.1 | Symbols: | Glycosyl hydrolase family 47 protein | chr1:9558752-9562091 FORWARD LENGTH=574
Repeat List (scaffold14137)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9637.1	1	308	310	77.41	308	70	1e-131
Target_name	Start	End	Length	Cov(%)
sp\|B9IEM0_POPTR	1	340	567	59.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9637.1	12	307	310	68.7	296	65	2e-120
Target_name	Start	End	Length	Cov(%)
AT1G27520.1	10	340	574	57.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14137	Augustus	mRNA	4862	8459	.	+	.	ID=Dca9637.1;Parent=Dca9637
scaffold14137	Augustus	exon	4862	4998	.	+	.	ID=Dca9637.1.exon1;Parent=Dca9637.1
scaffold14137	Augustus	exon	5892	5934	.	+	.	ID=Dca9637.1.exon2;Parent=Dca9637.1
scaffold14137	Augustus	exon	6038	6103	.	+	.	ID=Dca9637.1.exon3;Parent=Dca9637.1
scaffold14137	Augustus	exon	6181	6242	.	+	.	ID=Dca9637.1.exon4;Parent=Dca9637.1
scaffold14137	Augustus	exon	6343	6442	.	+	.	ID=Dca9637.1.exon5;Parent=Dca9637.1
scaffold14137	Augustus	exon	7086	7150	.	+	.	ID=Dca9637.1.exon6;Parent=Dca9637.1
scaffold14137	Augustus	exon	7717	7958	.	+	.	ID=Dca9637.1.exon7;Parent=Dca9637.1
scaffold14137	Augustus	exon	8065	8185	.	+	.	ID=Dca9637.1.exon8;Parent=Dca9637.1
scaffold14137	Augustus	exon	8363	8459	.	+	.	ID=Dca9637.1.exon9;Parent=Dca9637.1