Dca9660.1
Annotation
- 2-exons
- f-3
- sp|H2KWP6_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g25734#unknown#0F0P0C
- Repeat List (scaffold14156)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9660.1 |
2 |
337 |
338 |
59.46 |
336 |
57 |
2e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|H2KWP6_ORYSJ |
457 |
813 |
932 |
38.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9660.1 |
4 |
333 |
338 |
37.86 |
330 |
32 |
9e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
872 |
1267 |
1401 |
28.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14156 |
Augustus |
mRNA |
3583 |
4820 |
. |
+ |
. |
ID=Dca9660.1;Parent=Dca9660 |
| scaffold14156 |
Augustus |
exon |
3583 |
4070 |
. |
+ |
. |
ID=Dca9660.1.exon1;Parent=Dca9660.1 |
| scaffold14156 |
Augustus |
exon |
4290 |
4820 |
. |
+ |
. |
ID=Dca9660.1.exon2;Parent=Dca9660.1 |
