Dca9728.1
Annotation
- 3-exons
- f-1
- sp|B9RNH1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1347730#unknown#0F0P0C
- AT2G25920.1 | Symbols: | BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | chr2:11054425-11055916 REVERSE LENGTH=280
- Repeat List (scaffold142)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9728.1 |
14 |
242 |
313 |
48.88 |
229 |
66 |
5e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RNH1_RICCO |
20 |
249 |
269 |
85.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9728.1 |
4 |
231 |
313 |
39.93 |
228 |
52 |
4e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G25920.1 |
23 |
256 |
280 |
83.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold142 |
Augustus |
mRNA |
125009 |
127570 |
. |
- |
. |
ID=Dca9728.1;Parent=Dca9728 |
| scaffold142 |
Augustus |
exon |
125009 |
125729 |
. |
- |
. |
ID=Dca9728.1.exon1;Parent=Dca9728.1 |
| scaffold142 |
Augustus |
exon |
126326 |
126423 |
. |
- |
. |
ID=Dca9728.1.exon2;Parent=Dca9728.1 |
| scaffold142 |
Augustus |
exon |
127448 |
127570 |
. |
- |
. |
ID=Dca9728.1.exon3;Parent=Dca9728.1 |
