Dca977.1
Annotation
- 4-exons
- f-1
- sp|B9IPU0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_914128#unknown#0F0P0C
- AT1G28760.1 | Symbols: | Uncharacterized conserved protein (DUF2215) | chr1:10103158-10104588 FORWARD LENGTH=476
- Repeat List (scaffold1027)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca977.1 |
35 |
181 |
181 |
45.85 |
147 |
57 |
1e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IPU0_POPTR |
11 |
155 |
314 |
46.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca977.1 |
32 |
180 |
181 |
32.59 |
149 |
40 |
3e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0654500-01 |
78 |
217 |
540 |
25.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1027 |
Augustus |
mRNA |
2948 |
4424 |
. |
+ |
. |
ID=Dca977.1;Parent=Dca977 |
| scaffold1027 |
Augustus |
exon |
2948 |
3038 |
. |
+ |
. |
ID=Dca977.1.exon1;Parent=Dca977.1 |
| scaffold1027 |
Augustus |
exon |
3742 |
3961 |
. |
+ |
. |
ID=Dca977.1.exon2;Parent=Dca977.1 |
| scaffold1027 |
Augustus |
exon |
4086 |
4243 |
. |
+ |
. |
ID=Dca977.1.exon3;Parent=Dca977.1 |
| scaffold1027 |
Augustus |
exon |
4348 |
4424 |
. |
+ |
. |
ID=Dca977.1.exon4;Parent=Dca977.1 |
