Dca9845.1
Annotation
- 3-exons
- f-1
- sp|B9I7I6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_662705#unknown#0F0P0C
- AT3G05500.1 | Symbols: | Rubber elongation factor protein (REF) | chr3:1593540-1594802 FORWARD LENGTH=246
- Repeat List (scaffold1425)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9845.1 |
1 |
241 |
249 |
65.06 |
241 |
67 |
6e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I7I6_POPTR |
1 |
241 |
241 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9845.1 |
15 |
238 |
249 |
59.43 |
224 |
67 |
3e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G05500.1 |
17 |
240 |
246 |
91.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1425 |
Augus-PASA |
mRNA |
80375 |
82381 |
. |
- |
. |
ID=Dca9845.1;Parent=Dca9845 |
| scaffold1425 |
Augus-PASA |
exon |
80375 |
80863 |
. |
- |
. |
ID=Dca9845.1.exon1;Parent=Dca9845.1 |
| scaffold1425 |
Augus-PASA |
exon |
81682 |
81909 |
. |
- |
. |
ID=Dca9845.1.exon2;Parent=Dca9845.1 |
| scaffold1425 |
Augus-PASA |
exon |
82349 |
82381 |
. |
- |
. |
ID=Dca9845.1.exon3;Parent=Dca9845.1 |
