Carnation DB

Dca9881.1

Annotation

22-exons
f-1
sp|A5AHH3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032907#GO:0004559;GO:0030246;GO:0008270;GO:0006013#3F1P0C
AT5G13980.1 | Symbols: | Glycosyl hydrolase family 38 protein | chr5:4508626-4514334 FORWARD LENGTH=1024
Repeat List (scaffold1427)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9881.1	1	756	762	66.14	756	62	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AHH3_VITVI	79	875	943	84.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9881.1	1	755	762	62.72	755	55	0
Target_name	Start	End	Length	Cov(%)
AT5G13980.1	131	1011	1024	86.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1427	Augustus	mRNA	43012	51816	.	-	.	ID=Dca9881.1;Parent=Dca9881
scaffold1427	Augustus	exon	43012	43230	.	-	.	ID=Dca9881.1.exon1;Parent=Dca9881.1
scaffold1427	Augustus	exon	43312	43380	.	-	.	ID=Dca9881.1.exon2;Parent=Dca9881.1
scaffold1427	Augustus	exon	44271	44318	.	-	.	ID=Dca9881.1.exon3;Parent=Dca9881.1
scaffold1427	Augustus	exon	44443	44538	.	-	.	ID=Dca9881.1.exon4;Parent=Dca9881.1
scaffold1427	Augustus	exon	44629	44739	.	-	.	ID=Dca9881.1.exon5;Parent=Dca9881.1
scaffold1427	Augustus	exon	45149	45233	.	-	.	ID=Dca9881.1.exon6;Parent=Dca9881.1
scaffold1427	Augustus	exon	45363	45475	.	-	.	ID=Dca9881.1.exon7;Parent=Dca9881.1
scaffold1427	Augustus	exon	45814	45879	.	-	.	ID=Dca9881.1.exon8;Parent=Dca9881.1
scaffold1427	Augustus	exon	46073	46192	.	-	.	ID=Dca9881.1.exon9;Parent=Dca9881.1
scaffold1427	Augustus	exon	46272	46319	.	-	.	ID=Dca9881.1.exon10;Parent=Dca9881.1
scaffold1427	Augustus	exon	46825	46896	.	-	.	ID=Dca9881.1.exon11;Parent=Dca9881.1
scaffold1427	Augustus	exon	47004	47063	.	-	.	ID=Dca9881.1.exon12;Parent=Dca9881.1
scaffold1427	Augustus	exon	47202	47270	.	-	.	ID=Dca9881.1.exon13;Parent=Dca9881.1
scaffold1427	Augustus	exon	47510	47649	.	-	.	ID=Dca9881.1.exon14;Parent=Dca9881.1
scaffold1427	Augustus	exon	47759	47975	.	-	.	ID=Dca9881.1.exon15;Parent=Dca9881.1
scaffold1427	Augustus	exon	48840	49007	.	-	.	ID=Dca9881.1.exon16;Parent=Dca9881.1
scaffold1427	Augustus	exon	49100	49193	.	-	.	ID=Dca9881.1.exon17;Parent=Dca9881.1
scaffold1427	Augustus	exon	49284	49384	.	-	.	ID=Dca9881.1.exon18;Parent=Dca9881.1
scaffold1427	Augustus	exon	50544	50615	.	-	.	ID=Dca9881.1.exon19;Parent=Dca9881.1
scaffold1427	Augustus	exon	50739	50822	.	-	.	ID=Dca9881.1.exon20;Parent=Dca9881.1
scaffold1427	Augustus	exon	51055	51132	.	-	.	ID=Dca9881.1.exon21;Parent=Dca9881.1
scaffold1427	Augustus	exon	51658	51816	.	-	.	ID=Dca9881.1.exon22;Parent=Dca9881.1