Carnation DB

Dca9889.1

Annotation

8-exons
f-1
sp|G7KR78_MEDTR#Mitochondrial inner membrane protein OXA1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g036950#GO:0016021;GO:0051205#0F1P1C
Repeat List (scaffold14275)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9889.1	1	351	413	52.78	351	60	2e-116
Target_name	Start	End	Length	Cov(%)
sp\|G7KR78_MEDTR	1	358	446	80.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9889.1	1	413	413	50.36	413	48	5e-103
Target_name	Start	End	Length	Cov(%)
AT5G62050.1	1	412	429	96.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14275	Augus-PASA	mRNA	1	3847	.	-	.	ID=Dca9889.1;Parent=Dca9889
scaffold14275	Augus-PASA	exon	1	229	.	-	.	ID=Dca9889.1.exon1;Parent=Dca9889.1
scaffold14275	Augus-PASA	exon	396	450	.	-	.	ID=Dca9889.1.exon2;Parent=Dca9889.1
scaffold14275	Augus-PASA	exon	929	1036	.	-	.	ID=Dca9889.1.exon3;Parent=Dca9889.1
scaffold14275	Augus-PASA	exon	1266	1397	.	-	.	ID=Dca9889.1.exon4;Parent=Dca9889.1
scaffold14275	Augus-PASA	exon	1476	1551	.	-	.	ID=Dca9889.1.exon5;Parent=Dca9889.1
scaffold14275	Augus-PASA	exon	2255	2313	.	-	.	ID=Dca9889.1.exon6;Parent=Dca9889.1
scaffold14275	Augus-PASA	exon	3164	3211	.	-	.	ID=Dca9889.1.exon7;Parent=Dca9889.1
scaffold14275	Augus-PASA	exon	3314	3847	.	-	.	ID=Dca9889.1.exon8;Parent=Dca9889.1