Carnation DB

Dca9908.1

Annotation

5-exons
f-1
sp|Q65XV4_ORYSJ#Putative uncharacterized protein P0016H04.14#Oryza sativa subsp japonica (Rice)#Name=P0016H04.14#GO:0005524;GO:0004386#2F0P0C
sp|Q2R0W4_ORYSJ#AT hook motif-containing protein, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g41190#GO:0005524;GO:0004386#2F0P0C
Repeat List (scaffold1429)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9908.1	2	337	843	19.21	336	43	1e-85
Target_name	Start	End	Length	Cov(%)
sp\|Q65XV4_ORYSJ	204	583	1525	24.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9908.1	2	332	843	15.53	331	35	3e-61
Target_name	Start	End	Length	Cov(%)
Os12t0539700-01	119	495	504	74.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1429	Augustus	mRNA	40702	47589	.	+	.	ID=Dca9908.1;Parent=Dca9908
scaffold1429	Augustus	exon	40702	41377	.	+	.	ID=Dca9908.1.exon1;Parent=Dca9908.1
scaffold1429	Augustus	exon	41513	41833	.	+	.	ID=Dca9908.1.exon2;Parent=Dca9908.1
scaffold1429	Augustus	exon	42246	42389	.	+	.	ID=Dca9908.1.exon3;Parent=Dca9908.1
scaffold1429	Augustus	exon	45940	46450	.	+	.	ID=Dca9908.1.exon4;Parent=Dca9908.1
scaffold1429	Augustus	exon	46710	47589	.	+	.	ID=Dca9908.1.exon5;Parent=Dca9908.1