Carnation DB

Dca9937.1

Annotation

8-exons
f-1
sp|B9N3B1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_784118#GO:0016020;GO:0005216#1F0P1C
sp|B9SF64_RICCO#Cyclic nucleotide-gated ion channel, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1276950#unknown#0F0P0C
Repeat List (scaffold143)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9937.1	3	414	416	47.83	412	47	3e-104
Target_name	Start	End	Length	Cov(%)
sp\|B9N3B1_POPTR	170	592	785	53.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9937.1	9	414	416	42.3	406	43	1e-96
Target_name	Start	End	Length	Cov(%)
AT3G17690.1	142	549	729	55.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold143	Augustus	mRNA	243627	246401	.	+	.	ID=Dca9937.1;Parent=Dca9937
scaffold143	Augustus	exon	243627	243809	.	+	.	ID=Dca9937.1.exon1;Parent=Dca9937.1
scaffold143	Augustus	exon	243917	244012	.	+	.	ID=Dca9937.1.exon2;Parent=Dca9937.1
scaffold143	Augustus	exon	244101	244238	.	+	.	ID=Dca9937.1.exon3;Parent=Dca9937.1
scaffold143	Augustus	exon	245020	245256	.	+	.	ID=Dca9937.1.exon4;Parent=Dca9937.1
scaffold143	Augustus	exon	245365	245622	.	+	.	ID=Dca9937.1.exon5;Parent=Dca9937.1
scaffold143	Augustus	exon	245725	245870	.	+	.	ID=Dca9937.1.exon6;Parent=Dca9937.1
scaffold143	Augustus	exon	246111	246188	.	+	.	ID=Dca9937.1.exon7;Parent=Dca9937.1
scaffold143	Augustus	exon	246287	246401	.	+	.	ID=Dca9937.1.exon8;Parent=Dca9937.1