Carnation DB

Dca9940.1

Annotation

5-exons
f-1
sp|G7K6G2_MEDTR#Cyclic nucleotide gated channel#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g007630#GO:0016020;GO:0005216#1F0P1C
Repeat List (scaffold143)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9940.1	184	380	386	22.02	197	42	2e-39
Target_name	Start	End	Length	Cov(%)
sp\|G7K6G2_MEDTR	237	431	742	26.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9940.1	179	378	386	22.27	200	42	1e-38
Target_name	Start	End	Length	Cov(%)
Os06t0207700-01	228	431	736	27.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold143	Augustus	mRNA	254920	261447	.	+	.	ID=Dca9940.1;Parent=Dca9940
scaffold143	Augustus	exon	254920	255307	.	+	.	ID=Dca9940.1.exon1;Parent=Dca9940.1
scaffold143	Augustus	exon	258843	259012	.	+	.	ID=Dca9940.1.exon2;Parent=Dca9940.1
scaffold143	Augustus	exon	259626	259763	.	+	.	ID=Dca9940.1.exon3;Parent=Dca9940.1
scaffold143	Augustus	exon	260892	261128	.	+	.	ID=Dca9940.1.exon4;Parent=Dca9940.1
scaffold143	Augustus	exon	261220	261447	.	+	.	ID=Dca9940.1.exon5;Parent=Dca9940.1