Carnation DB

Dca9979.1

Annotation

6-exons
f-1
sp|A9PG23_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_751998#GO:0043169;GO:0004553;GO:0005975#2F1P0C
Os01t0947000-01 Similar to Beta-1,3-glucanase precursor.
Repeat List (scaffold1432)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9979.1	1	98	399	14.78	98	61	8e-26
Target_name	Start	End	Length	Cov(%)
sp\|A9PG23_POPTR	241	335	338	28.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9979.1	123	393	399	29.07	271	43	6e-52
Target_name	Start	End	Length	Cov(%)
Os01t0947000-01	52	311	633	41.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1432	Augustus	mRNA	4502	16632	.	+	.	ID=Dca9979.1;Parent=Dca9979
scaffold1432	Augustus	exon	4502	4811	.	+	.	ID=Dca9979.1.exon1;Parent=Dca9979.1
scaffold1432	Augustus	exon	5529	5582	.	+	.	ID=Dca9979.1.exon2;Parent=Dca9979.1
scaffold1432	Augustus	exon	5727	5799	.	+	.	ID=Dca9979.1.exon3;Parent=Dca9979.1
scaffold1432	Augustus	exon	7609	7675	.	+	.	ID=Dca9979.1.exon4;Parent=Dca9979.1
scaffold1432	Augustus	exon	7965	8070	.	+	.	ID=Dca9979.1.exon5;Parent=Dca9979.1
scaffold1432	Augustus	exon	16043	16632	.	+	.	ID=Dca9979.1.exon6;Parent=Dca9979.1