Carnation DB

Dca9982.1

Annotation

6-exons
f-1
sp|D7M220_ARALL#SNF7 family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_325480#GO:0015031#0F1P0C
Repeat List (scaffold1432)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9982.1	1	224	224	75	224	75	3e-87
Target_name	Start	End	Length	Cov(%)
sp\|D7M220_ARALL	1	217	217	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9982.1	1	224	224	76.33	224	76	1e-88
Target_name	Start	End	Length	Cov(%)
AT5G09260.1	1	216	216	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1432	Augus-PASA	mRNA	48132	50822	.	+	.	ID=Dca9982.1;Parent=Dca9982
scaffold1432	Augus-PASA	exon	48132	48233	.	+	.	ID=Dca9982.1.exon1;Parent=Dca9982.1
scaffold1432	Augus-PASA	exon	49301	49453	.	+	.	ID=Dca9982.1.exon2;Parent=Dca9982.1
scaffold1432	Augus-PASA	exon	49555	49707	.	+	.	ID=Dca9982.1.exon3;Parent=Dca9982.1
scaffold1432	Augus-PASA	exon	50258	50341	.	+	.	ID=Dca9982.1.exon4;Parent=Dca9982.1
scaffold1432	Augus-PASA	exon	50426	50582	.	+	.	ID=Dca9982.1.exon5;Parent=Dca9982.1
scaffold1432	Augus-PASA	exon	50797	50822	.	+	.	ID=Dca9982.1.exon6;Parent=Dca9982.1