Carnation DB

Dca9984.1

Annotation

5-exons
f-1
sp|B9N736_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_583736#unknown#0F0P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold1432)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9984.1	1	124	227	22.46	124	32	1e-17
Target_name	Start	End	Length	Cov(%)
sp\|B9N736_POPTR	18	181	517	31.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9984.1	37	115	227	13.65	79	40	2e-12
Target_name	Start	End	Length	Cov(%)
AT3G24255.1	63	141	746	10.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1432	Augustus	mRNA	88502	92244	.	-	.	ID=Dca9984.1;Parent=Dca9984
scaffold1432	Augustus	exon	88502	88663	.	-	.	ID=Dca9984.1.exon1;Parent=Dca9984.1
scaffold1432	Augustus	exon	90051	90188	.	-	.	ID=Dca9984.1.exon2;Parent=Dca9984.1
scaffold1432	Augustus	exon	90282	90546	.	-	.	ID=Dca9984.1.exon3;Parent=Dca9984.1
scaffold1432	Augustus	exon	90667	90778	.	-	.	ID=Dca9984.1.exon4;Parent=Dca9984.1
scaffold1432	Augustus	exon	92238	92244	.	-	.	ID=Dca9984.1.exon5;Parent=Dca9984.1