Carnation DB

Dca9998.1

Annotation

5-exons
f-1
sp|B9HAF3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_763509#unknown#0F0P0C
AT4G32270.1 | Symbols: | Ubiquitin-like superfamily protein | chr4:15575015-15576360 REVERSE LENGTH=239
Repeat List (scaffold1433)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9998.1	55	288	298	37.91	234	45	1e-44
Target_name	Start	End	Length	Cov(%)
sp\|B9HAF3_POPTR	38	284	292	84.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9998.1	51	174	298	23.15	124	56	5e-36
Target_name	Start	End	Length	Cov(%)
AT4G32270.1	3	125	239	51.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1433	Augustus	mRNA	51961	53364	.	-	.	ID=Dca9998.1;Parent=Dca9998
scaffold1433	Augustus	exon	51961	52270	.	-	.	ID=Dca9998.1.exon1;Parent=Dca9998.1
scaffold1433	Augustus	exon	52350	52438	.	-	.	ID=Dca9998.1.exon2;Parent=Dca9998.1
scaffold1433	Augustus	exon	52528	52627	.	-	.	ID=Dca9998.1.exon3;Parent=Dca9998.1
scaffold1433	Augustus	exon	52717	52816	.	-	.	ID=Dca9998.1.exon4;Parent=Dca9998.1
scaffold1433	Augustus	exon	53067	53364	.	-	.	ID=Dca9998.1.exon5;Parent=Dca9998.1