scaffold1017 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold1017 |
134 |
168 |
+ |
(TA)n |
Simple_repeat |
scaffold1017 |
862 |
980 |
+ |
RS10606 |
Unspecified |
scaffold1017 |
920 |
1090 |
+ |
RS8556 |
Unspecified |
scaffold1017 |
1259 |
1612 |
+ |
RS10606 |
Unspecified |
scaffold1017 |
1635 |
2482 |
- |
PL818 |
Unspecified |
scaffold1017 |
2182 |
2588 |
+ |
RS2837 |
Unspecified |
scaffold1017 |
2572 |
2677 |
+ |
RS11779 |
Unspecified |
scaffold1017 |
4374 |
5061 |
+ |
Copia-4_GM-I |
LTR/Copia |
scaffold1017 |
5064 |
5319 |
- |
PL818 |
Unspecified |
scaffold1017 |
5397 |
5446 |
+ |
(AATATAA)n |
Simple_repeat |
scaffold1017 |
5781 |
5852 |
+ |
(TTTTAAT)n |
Simple_repeat |
scaffold1017 |
7611 |
7681 |
+ |
PL296 |
Unspecified |
scaffold1017 |
7662 |
8246 |
- |
RS95 |
Unspecified |
scaffold1017 |
8343 |
8451 |
+ |
RS4328 |
Unspecified |
scaffold1017 |
8468 |
8796 |
+ |
RS4576 |
Unspecified |
scaffold1017 |
8642 |
8907 |
+ |
RS4332 |
Unspecified |
scaffold1017 |
8905 |
9024 |
+ |
RS3483 |
Unspecified |
scaffold1017 |
9045 |
9201 |
+ |
RS2404 |
Unspecified |
scaffold1017 |
9072 |
9537 |
+ |
RS3207 |
Unspecified |
scaffold1017 |
12489 |
12530 |
+ |
RS4576 |
Unspecified |
scaffold1017 |
12950 |
12991 |
+ |
(ACTAATT)n |
Simple_repeat |
scaffold1017 |
13085 |
13245 |
+ |
RS10461 |
Unspecified |
scaffold1017 |
13342 |
13430 |
+ |
RS3207 |
Unspecified |
scaffold1017 |
13497 |
13863 |
+ |
(ATTA)n |
Simple_repeat |
scaffold1017 |
13497 |
13546 |
+ |
(ATTA)n |
Simple_repeat |
scaffold1017 |
13534 |
13863 |
- |
RS4789 |
Unspecified |
scaffold1017 |
13571 |
14125 |
+ |
RS3529 |
Unspecified |
scaffold1017 |
14118 |
14193 |
+ |
RS4135 |
Unspecified |
scaffold1017 |
15544 |
15584 |
+ |
RS4576 |
Unspecified |
scaffold1017 |
16866 |
17209 |
+ |
RS13966 |
Unspecified |
scaffold1017 |
17298 |
17421 |
+ |
RS14481 |
Unspecified |
scaffold1017 |
18584 |
18801 |
+ |
RS12589 |
Unspecified |
scaffold1017 |
19699 |
19738 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold1017 |
20436 |
20468 |
+ |
(AGATTT)n |
Simple_repeat |
scaffold1017 |
20750 |
20782 |
+ |
(A)n |
Simple_repeat |
scaffold1017 |
20810 |
20963 |
- |
RS138 |
Unspecified |
scaffold1017 |
20854 |
21031 |
+ |
RS5822 |
Unspecified |
scaffold1017 |
21480 |
21543 |
+ |
(TTTT)n |
Simple_repeat |
scaffold1017 |
21835 |
21861 |
+ |
(TTTTAT)n |
Simple_repeat |
scaffold1017 |
21885 |
22063 |
+ |
RS2015 |
Unspecified |
scaffold1017 |
22068 |
22183 |
+ |
RS2015 |
Unspecified |
scaffold1017 |
22141 |
22425 |
+ |
RS2015 |
Unspecified |
scaffold1017 |
22435 |
24670 |
+ |
(CAGCT)n |
Simple_repeat |
scaffold1017 |
24696 |
24741 |
+ |
RS11600 |
Unspecified |
scaffold1017 |
24740 |
24932 |
- |
PL476 |
Unspecified |
scaffold1017 |
25374 |
25433 |
+ |
RS782 |
Unspecified |
scaffold1017 |
25516 |
25613 |
+ |
RS782 |
Unspecified |
scaffold1017 |
25615 |
25703 |
+ |
RS17699 |
Unspecified |
scaffold1017 |
25869 |
25951 |
+ |
(TAT)n |
Simple_repeat |
scaffold1017 |
25938 |
25964 |
+ |
(TAC)n |
Simple_repeat |
scaffold1017 |
26772 |
26838 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold1017 |
26871 |
26903 |
+ |
A-rich |
Low_complexity |
scaffold1017 |
26906 |
26951 |
+ |
(TTATA)n |
Simple_repeat |
scaffold1017 |
27214 |
27238 |
+ |
(A)n |
Simple_repeat |
scaffold1017 |
27733 |
27769 |
+ |
(ATTATAA)n |
Simple_repeat |
scaffold1017 |
27959 |
28016 |
+ |
A-rich |
Low_complexity |
scaffold1017 |
28045 |
28084 |
+ |
(ATAATC)n |
Simple_repeat |
scaffold1017 |
28195 |
28233 |
+ |
(TAT)n |
Simple_repeat |
scaffold1017 |
28633 |
28696 |
+ |
(AAT)n |
Simple_repeat |
scaffold1017 |
28865 |
28930 |
+ |
A-rich |
Low_complexity |
scaffold1017 |
29026 |
29073 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
scaffold1017 |
29124 |
29326 |
+ |
RS28 |
Unspecified |
scaffold1017 |
29323 |
29787 |
+ |
PL658 |
Unspecified |
scaffold1017 |
31946 |
32155 |
- |
PL296 |
Unspecified |
scaffold1017 |
32477 |
32505 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold1017 |
32562 |
32593 |
+ |
(TATATGA)n |
Simple_repeat |
scaffold1017 |
32562 |
32681 |
+ |
(TATATGA)n |
Simple_repeat |
scaffold1017 |
32587 |
32681 |
+ |
RS11600 |
Unspecified |
scaffold1017 |
33301 |
33329 |
+ |
(A)n |
Simple_repeat |
scaffold1017 |
33342 |
33452 |
+ |
RS9534 |
Unspecified |
scaffold1017 |
33393 |
33531 |
+ |
RS6043 |
Unspecified |
scaffold1017 |
36382 |
36496 |
+ |
RS4130 |
Unspecified |
scaffold1017 |
36579 |
36886 |
+ |
RS4576 |
Unspecified |
scaffold1017 |
36730 |
36958 |
+ |
RS4332 |
Unspecified |
scaffold1017 |
36981 |
37074 |
+ |
RS3483 |
Unspecified |
scaffold1017 |
37232 |
37465 |
+ |
RS3207 |
Unspecified |
scaffold1017 |
37466 |
37534 |
+ |
RS3207 |
Unspecified |
scaffold1017 |
37992 |
38273 |
+ |
RS1746 |
Unspecified |
scaffold1017 |
38047 |
38344 |
- |
RS1746 |
Unspecified |
scaffold1017 |
38664 |
38707 |
+ |
(TTTTGTT)n |
Simple_repeat |
scaffold1017 |
39089 |
39131 |
- |
PL609 |
Unspecified |
scaffold1017 |
39133 |
39241 |
- |
PL715 |
Unspecified |
scaffold1017 |
39133 |
39255 |
+ |
PL294 |
Unspecified |
scaffold1017 |
39316 |
39449 |
- |
PL294 |
Unspecified |
scaffold1017 |
39438 |
39639 |
+ |
Copia-64_GM-I |
LTR/Copia |
scaffold1017 |
39637 |
39932 |
- |
PL942 |
Unspecified |
scaffold1017 |
40085 |
40134 |
+ |
(TAA)n |
Simple_repeat |
scaffold1017 |
40427 |
40894 |
- |
PL87 |
Unspecified |
scaffold1017 |
40983 |
41060 |
+ |
(ATT)n |
Simple_repeat |
scaffold1017 |
41197 |
41308 |
+ |
(A)n |
Simple_repeat |
scaffold1017 |
41217 |
41308 |
+ |
(A)n |
Simple_repeat |
scaffold1017 |
41292 |
41308 |
+ |
(A)n |
Simple_repeat |
scaffold1017 |
41442 |
41663 |
- |
PL760 |
Unspecified |
scaffold1017 |
42299 |
42336 |
+ |
A-rich |
Low_complexity |
scaffold1017 |
43274 |
43564 |
- |
LTR2-ZM_LTR |
LTR |
scaffold1017 |
43780 |
44070 |
- |
LTR-1_SBi-LTR |
LTR |
scaffold1017 |
44119 |
44239 |
+ |
RS2999 |
Unspecified |
scaffold1017 |
44244 |
44592 |
+ |
RS2370 |
Unspecified |
scaffold1017 |
44926 |
44945 |
+ |
(T)n |
Simple_repeat |
scaffold1017 |
45053 |
45204 |
- |
PL700 |
Unspecified |
scaffold1017 |
45644 |
45705 |
+ |
RS4135 |
Unspecified |
scaffold1017 |
48732 |
48761 |
+ |
(T)n |
Simple_repeat |
scaffold1017 |
50540 |
52348 |
- |
LINE |
LINE(TransposonPSI) |
scaffold1017 |
50817 |
51593 |
- |
L1-10_Mad |
LINE/L1 |
scaffold1017 |
53161 |
53193 |
+ |
(TTTTAG)n |
Simple_repeat |
scaffold1017 |
55056 |
55520 |
+ |
RS14460 |
Unspecified |
scaffold1017 |
56118 |
56295 |
+ |
RS6897 |
Unspecified |
scaffold1017 |
56522 |
56668 |
+ |
RS1543 |
Unspecified |
scaffold1017 |
57016 |
57118 |
+ |
(TGTTA)n |
Simple_repeat |
scaffold1017 |
57065 |
57118 |
+ |
(TGTTA)n |
Simple_repeat |
scaffold1017 |
57209 |
57921 |
+ |
RS1051 |
Unspecified |
scaffold1017 |
57820 |
58927 |
+ |
RS1122 |
Unspecified |
scaffold1017 |
58948 |
58980 |
+ |
(TTTTAG)n |
Simple_repeat |
scaffold1017 |
60843 |
61307 |
+ |
RS14460 |
Unspecified |
scaffold1017 |
61307 |
61406 |
+ |
RS16947 |
Unspecified |
scaffold1017 |
61564 |
61902 |
+ |
RS13966 |
Unspecified |
scaffold1017 |
61980 |
62103 |
+ |
RS14481 |
Unspecified |
scaffold1017 |
62938 |
62962 |
+ |
(A)n |
Simple_repeat |
scaffold1017 |
63093 |
63276 |
+ |
RS12589 |
Unspecified |
scaffold1017 |
63976 |
64267 |
+ |
PL352 |
Unspecified |
scaffold1017 |
65385 |
65494 |
+ |
RS9534 |
Unspecified |
scaffold1017 |
65436 |
65573 |
+ |
RS6043 |
Unspecified |
scaffold1017 |
66609 |
66635 |
+ |
(AATTG)n |
Simple_repeat |
scaffold1017 |
66672 |
66879 |
+ |
RS1482 |
Unspecified |
scaffold1017 |
67032 |
67844 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold1017 |
67613 |
67648 |
+ |
(CCTACA)n |
Simple_repeat |
scaffold1017 |
67909 |
68383 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold1017 |
68351 |
69182 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold1017 |
68885 |
69243 |
- |
Copia-77_SB-I |
LTR/Copia |
scaffold1017 |
69562 |
71180 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold1017 |
71176 |
71383 |
+ |
RS1482 |
Unspecified |
scaffold1017 |
71570 |
71611 |
+ |
(ACTAATT)n |
Simple_repeat |
scaffold1017 |
71706 |
71868 |
+ |
RS10461 |
Unspecified |
scaffold1017 |
72251 |
72334 |
- |
RS4789 |
Unspecified |
scaffold1017 |
72385 |
72639 |
+ |
RS4135 |
Unspecified |
scaffold1017 |
73205 |
73314 |
+ |
RS9534 |
Unspecified |
scaffold1017 |
73256 |
73426 |
+ |
RS6043 |
Unspecified |
scaffold1017 |
76372 |
76421 |
+ |
(TGTTTT)n |
Simple_repeat |
scaffold1017 |
76549 |
76682 |
+ |
RS10606 |
Unspecified |
scaffold1017 |
76617 |
76945 |
+ |
RS8556 |
Unspecified |
scaffold1017 |
77511 |
77544 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold1017 |
77511 |
77792 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold1017 |
77535 |
77792 |
- |
RS41 |
Unspecified |
scaffold1017 |
77802 |
77840 |
+ |
(TTTAA)n |
Simple_repeat |
scaffold1017 |
77842 |
77940 |
- |
RS4475 |
Unspecified |
scaffold1017 |
78118 |
78234 |
+ |
RS14777 |
Unspecified |
scaffold1017 |
78332 |
78494 |
- |
PL688 |
Unspecified |
scaffold1017 |
78402 |
78512 |
- |
PL293 |
Unspecified |
scaffold1017 |
78749 |
78770 |
+ |
(T)n |
Simple_repeat |
scaffold1017 |
79646 |
80029 |
- |
RS512 |
Unspecified |
scaffold1017 |
80579 |
80707 |
+ |
RS1526 |
Unspecified |
scaffold1017 |
80727 |
80771 |
+ |
(TA)n |
Simple_repeat |
scaffold1017 |
82627 |
82664 |
+ |
(GTTCGA)n |
Simple_repeat |
scaffold1017 |
83107 |
83144 |
+ |
(TTA)n |
Simple_repeat |
scaffold1017 |
84214 |
84571 |
+ |
RS10606 |
Unspecified |
scaffold1017 |
84604 |
84712 |
+ |
RS4328 |
Unspecified |
scaffold1017 |
84724 |
85049 |
+ |
RS4576 |
Unspecified |
scaffold1017 |
84895 |
85160 |
+ |
RS4332 |
Unspecified |
scaffold1017 |
85158 |
85277 |
+ |
RS3483 |
Unspecified |
scaffold1017 |
85302 |
85450 |
+ |
RS2404 |
Unspecified |
scaffold1017 |
85321 |
85786 |
+ |
RS3207 |
Unspecified |
scaffold1017 |
86673 |
86727 |
+ |
(A)n |
Simple_repeat |
scaffold1017 |
88914 |
88955 |
+ |
RS4576 |
Unspecified |
scaffold1017 |
89115 |
89244 |
+ |
RS18146 |
Unspecified |
scaffold1017 |
89360 |
89400 |
+ |
(TTAA)n |
Simple_repeat |
scaffold1017 |
89428 |
89474 |
+ |
(AAT)n |
Simple_repeat |
scaffold1017 |
89852 |
89874 |
+ |
(T)n |
Simple_repeat |
scaffold1017 |
89953 |
89966 |
+ |
(TTCAATT)n |
Simple_repeat |
scaffold1017 |
89967 |
90003 |
+ |
(TTTCAT)n |
Simple_repeat |
scaffold1017 |
90305 |
90343 |
+ |
RS17 |
Unspecified |
scaffold1017 |
90580 |
90641 |
+ |
RS4135 |
Unspecified |
scaffold1017 |
93722 |
93762 |
+ |
RS4576 |
Unspecified |
scaffold1017 |
94061 |
94175 |
+ |
RS4130 |
Unspecified |
scaffold1017 |
94208 |
94225 |
+ |
(AT)n |
Simple_repeat |
scaffold1017 |
94298 |
94397 |
+ |
RS16947 |
Unspecified |
scaffold1017 |
94545 |
94883 |
+ |
RS13966 |
Unspecified |
scaffold1017 |
94922 |
95045 |
+ |
RS14481 |
Unspecified |
scaffold1017 |
95631 |
95717 |
- |
RS15154 |
Unspecified |
scaffold1017 |
95632 |
95703 |
+ |
RS18111 |
Unspecified |
scaffold1017 |
96282 |
96458 |
+ |
RS12589 |
Unspecified |
scaffold1017 |
97227 |
97330 |
+ |
RS1323 |
Unspecified |
scaffold1017 |
97247 |
97357 |
+ |
RS1323 |
Unspecified |
scaffold1017 |
97382 |
97451 |
+ |
(AAT)n |
Simple_repeat |
scaffold1017 |
97382 |
97834 |
+ |
(AAT)n |
Simple_repeat |
scaffold1017 |
97435 |
97834 |
- |
PL729 |
Unspecified |
scaffold1017 |
97840 |
97955 |
+ |
(AAACTTCAGA)n |
Simple_repeat |
scaffold1017 |
98290 |
98342 |
+ |
A-rich |
Low_complexity |
scaffold1017 |
98795 |
98851 |
+ |
(ACA)n |
Simple_repeat |
scaffold1017 |
98882 |
98914 |
+ |
(AGCACA)n |
Simple_repeat |
scaffold1017 |
99033 |
99382 |
- |
RS16270 |
Unspecified |
scaffold1017 |
99362 |
99512 |
+ |
RS405 |
Unspecified |
scaffold1017 |
99522 |
99857 |
+ |
PL377 |
Unspecified |
scaffold1017 |
131639 |
131764 |
+ |
RIRE1_I-int |
LTR/Copia |