scaffold10183 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold10183 |
391 |
587 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold10183 |
884 |
1111 |
- |
L1-5_STu |
LINE/L1 |
| scaffold10183 |
2108 |
2138 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold10183 |
2166 |
2885 |
+ |
RS695 |
Unspecified |
| scaffold10183 |
5470 |
5517 |
+ |
STOWAWAY2_ZM |
DNA/TcMar-Stowaway |
| scaffold10183 |
5933 |
6004 |
+ |
(TTGATT)n |
Simple_repeat |
| scaffold10183 |
6492 |
6870 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold10183 |
6660 |
6870 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold10183 |
6888 |
7547 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold10183 |
7703 |
7755 |
- |
RS3014 |
Unspecified |
| scaffold10183 |
8812 |
9033 |
- |
RS9302 |
Unspecified |
| scaffold10183 |
8976 |
9006 |
+ |
(TCTTT)n |
Simple_repeat |
| scaffold10183 |
9805 |
10075 |
+ |
RS944 |
Unspecified |
| scaffold10183 |
9864 |
10278 |
- |
RS4509 |
Unspecified |
| scaffold10183 |
15737 |
15772 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold10183 |
15793 |
15821 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold10183 |
15860 |
15901 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold10183 |
15902 |
15920 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold10183 |
16507 |
16805 |
- |
PL189 |
Unspecified |
| scaffold10183 |
17765 |
18807 |
+ |
Copia-2_SL-I |
LTR/Copia |
| scaffold10183 |
20276 |
20770 |
+ |
RS347 |
Unspecified |
| scaffold10183 |
20862 |
21196 |
- |
RS6134 |
Unspecified |
| scaffold10183 |
21506 |
21533 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold10183 |
21566 |
22076 |
- |
RS527 |
Unspecified |
| scaffold10183 |
23517 |
23824 |
+ |
RS8 |
Unspecified |
| scaffold10183 |
23870 |
23949 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold10183 |
25142 |
25236 |
+ |
A-rich |
Low_complexity |
| scaffold10183 |
26432 |
26478 |
+ |
(TG)n |
Simple_repeat |
| scaffold10183 |
27516 |
27547 |
+ |
(CTATTG)n |
Simple_repeat |
| scaffold10183 |
27574 |
27649 |
+ |
(TGCTTG)n |
Simple_repeat |
| scaffold10183 |
27574 |
27885 |
+ |
(TGCTTG)n |
Simple_repeat |
| scaffold10183 |
27636 |
27885 |
- |
RS1300 |
Unspecified |
| scaffold10183 |
28152 |
28603 |
+ |
RS413 |
Unspecified |
| scaffold10183 |
28942 |
29677 |
- |
RS706 |
Unspecified |
| scaffold10183 |
29613 |
30331 |
+ |
RS166 |
Unspecified |
| scaffold10183 |
30329 |
32030 |
- |
RS658 |
Unspecified |
| scaffold10183 |
31156 |
32459 |
- |
RS934 |
Unspecified |
| scaffold10183 |
32516 |
32774 |
+ |
(CTAACAT)n |
Simple_repeat |
| scaffold10183 |
32516 |
32576 |
+ |
(CTAACAT)n |
Simple_repeat |
| scaffold10183 |
32566 |
32774 |
- |
RS7985 |
Unspecified |
| scaffold10183 |
32797 |
34010 |
+ |
RS730 |
Unspecified |
| scaffold10183 |
33638 |
34623 |
+ |
RS21 |
Unspecified |
| scaffold10183 |
34027 |
35394 |
- |
RS838 |
Unspecified |
| scaffold10183 |
34917 |
35680 |
- |
RS437 |
Unspecified |
| scaffold10183 |
35633 |
36268 |
- |
RS435 |
Unspecified |
| scaffold10183 |
35702 |
36309 |
- |
RS166 |
Unspecified |
| scaffold10183 |
39547 |
39862 |
- |
RS934 |
Unspecified |
| scaffold10183 |
39863 |
39903 |
+ |
RS166 |
Unspecified |
| scaffold10183 |
39898 |
40102 |
+ |
RS903 |
Unspecified |
| scaffold10183 |
39985 |
40560 |
+ |
RS1381 |
Unspecified |
| scaffold10183 |
41006 |
41108 |
+ |
(TTTGCT)n |
Simple_repeat |
| scaffold10183 |
41536 |
42879 |
+ |
RS1123 |
Unspecified |
| scaffold10183 |
42892 |
43296 |
+ |
RS984 |
Unspecified |
| scaffold10183 |
43374 |
43499 |
+ |
RS7985 |
Unspecified |
| scaffold10183 |
43460 |
43505 |
+ |
PL956 |
Unspecified |
| scaffold10183 |
43495 |
44913 |
- |
RS1496 |
Unspecified |
| scaffold10183 |
44376 |
45218 |
+ |
RS658 |
Unspecified |
| scaffold10183 |
45227 |
45285 |
+ |
(TG)n |
Simple_repeat |
| scaffold10183 |
46650 |
46695 |
+ |
(TATTTTT)n |
Simple_repeat |
| scaffold10183 |
47378 |
47516 |
- |
RS2126 |
Unspecified |
| scaffold10183 |
47624 |
47831 |
+ |
RS1714 |
Unspecified |
| scaffold10183 |
47734 |
47875 |
- |
RS3094 |
Unspecified |
| scaffold10183 |
47786 |
47991 |
- |
RS3094 |
Unspecified |
| scaffold10183 |
48726 |
48774 |
+ |
A-rich |
Low_complexity |
| scaffold10183 |
48962 |
48988 |
+ |
(T)n |
Simple_repeat |
| scaffold10183 |
49086 |
49190 |
+ |
RS844 |
Unspecified |
| scaffold10183 |
49582 |
49730 |
+ |
RS14038 |
Unspecified |
| scaffold10183 |
52408 |
52670 |
- |
RS356 |
Unspecified |
| scaffold10183 |
52995 |
53076 |
+ |
RS1854 |
Unspecified |
| scaffold10183 |
53647 |
53794 |
- |
RS11145 |
Unspecified |
| scaffold10183 |
54392 |
54457 |
- |
RS79 |
Unspecified |
| scaffold10183 |
54554 |
54618 |
- |
ATHATN1 |
DNA/hAT-Ac |
| scaffold10183 |
54989 |
55099 |
+ |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold10183 |
55176 |
55292 |
- |
RS79 |
Unspecified |
| scaffold10183 |
55314 |
55363 |
+ |
(CTCACTCA)n |
Simple_repeat |
| scaffold10183 |
56522 |
56554 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold10183 |
56582 |
56784 |
+ |
RS28 |
Unspecified |
| scaffold10183 |
57441 |
57524 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold10183 |
58681 |
58724 |
+ |
(AGGGAAGGGG)n |
Simple_repeat |
| scaffold10183 |
59181 |
59211 |
+ |
(TTCCC)n |
Simple_repeat |
| scaffold10183 |
59288 |
59356 |
+ |
(TTCAAT)n |
Simple_repeat |
| scaffold10183 |
59396 |
59451 |
+ |
GA-rich |
Low_complexity |
| scaffold10183 |
59650 |
59801 |
+ |
RS757 |
Unspecified |
| scaffold10183 |
60070 |
60167 |
- |
PL9 |
Unspecified |
| scaffold10183 |
62230 |
62275 |
+ |
A-rich |
Low_complexity |
| scaffold10183 |
63107 |
63277 |
+ |
RS14952 |
Unspecified |
| scaffold10183 |
63998 |
64146 |
+ |
RS15809 |
Unspecified |
| scaffold10183 |
65276 |
65409 |
+ |
RS16311 |
Unspecified |
| scaffold10183 |
65469 |
65689 |
+ |
RS17905 |
Unspecified |
| scaffold10183 |
65981 |
66279 |
+ |
RS17548 |
Unspecified |
| scaffold10183 |
66376 |
66402 |
+ |
(CTTCTC)n |
Simple_repeat |
| scaffold10183 |
66806 |
66852 |
- |
CACTA_LP |
DNA/En-Spm |
| scaffold10183 |
67060 |
67126 |
+ |
DNA3-8_STu |
DNA |
| scaffold10183 |
67066 |
67139 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold10183 |
69498 |
69668 |
+ |
RS14952 |
Unspecified |
| scaffold10183 |
70374 |
70522 |
+ |
RS15809 |
Unspecified |
| scaffold10183 |
71652 |
71785 |
+ |
RS16311 |
Unspecified |
| scaffold10183 |
71845 |
72065 |
+ |
RS17905 |
Unspecified |
| scaffold10183 |
72357 |
72655 |
+ |
RS17548 |
Unspecified |
| scaffold10183 |
73170 |
73216 |
- |
CACTA_LP |
DNA/En-Spm |
| scaffold10183 |
73429 |
73453 |
+ |
(CATTAT)n |
Simple_repeat |
| scaffold10183 |
73454 |
73491 |
+ |
(ATT)n |
Simple_repeat |
| scaffold10183 |
73492 |
73509 |
+ |
(CATTAT)n |
Simple_repeat |
| scaffold10183 |
74255 |
74309 |
+ |
(CTTTT)n |
Simple_repeat |
| scaffold10183 |
74360 |
74377 |
+ |
(T)n |
Simple_repeat |
| scaffold10183 |
74629 |
74662 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold10183 |
74745 |
74891 |
+ |
RS4 |
Unspecified |
| scaffold10183 |
75116 |
75219 |
+ |
RS16382 |
Unspecified |
| scaffold10183 |
75687 |
75892 |
+ |
Copia-86_BRa-I |
LTR/Copia |
| scaffold10183 |
76953 |
77523 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold10183 |
77591 |
78001 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold10183 |
77828 |
77979 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold10183 |
78464 |
78588 |
- |
Copia-84_BRa-I |
LTR/Copia |
| scaffold10183 |
79144 |
79172 |
+ |
(AT)n |
Simple_repeat |
| scaffold10183 |
79490 |
79846 |
- |
RS1495 |
Unspecified |
| scaffold10183 |
79934 |
81175 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold10183 |
79995 |
80096 |
+ |
SHALINE15_MT |
LINE/L1 |
| scaffold10183 |
80309 |
80968 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold10183 |
81018 |
81094 |
+ |
ATLINE1_7 |
LINE/L1 |
| scaffold10183 |
82415 |
82934 |
- |
RS1495 |
Unspecified |
| scaffold10183 |
82935 |
83059 |
- |
RS10762 |
Unspecified |
| scaffold10183 |
83067 |
83364 |
- |
RS1348 |
Unspecified |
| scaffold10183 |
83377 |
83439 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold10183 |
85588 |
85856 |
- |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold10183 |
87692 |
87718 |
+ |
(T)n |
Simple_repeat |
| scaffold10183 |
89625 |
89653 |
+ |
(T)n |
Simple_repeat |