scaffold1047 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold1047 |
584 |
736 |
- |
RS3868 |
Unspecified |
scaffold1047 |
1263 |
2138 |
+ |
PL802 |
Unspecified |
scaffold1047 |
1392 |
2122 |
+ |
RS1560 |
Unspecified |
scaffold1047 |
2432 |
2810 |
- |
RS52 |
Unspecified |
scaffold1047 |
3449 |
3566 |
+ |
RS2693 |
Unspecified |
scaffold1047 |
3687 |
3726 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
3748 |
4012 |
+ |
RS109 |
Unspecified |
scaffold1047 |
4073 |
4202 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
4149 |
4202 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
4232 |
4644 |
+ |
RS2763 |
Unspecified |
scaffold1047 |
4582 |
4686 |
- |
RS9665 |
Unspecified |
scaffold1047 |
4643 |
4775 |
- |
RS9665 |
Unspecified |
scaffold1047 |
4732 |
4864 |
- |
RS9665 |
Unspecified |
scaffold1047 |
4823 |
4953 |
- |
RS9665 |
Unspecified |
scaffold1047 |
4910 |
5038 |
- |
RS9665 |
Unspecified |
scaffold1047 |
4999 |
5048 |
- |
RS9665 |
Unspecified |
scaffold1047 |
5235 |
5267 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
5382 |
5472 |
+ |
RS2693 |
Unspecified |
scaffold1047 |
5627 |
5665 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
5767 |
6209 |
- |
PL2 |
Unspecified |
scaffold1047 |
6463 |
6475 |
+ |
(TTTTTAA)n |
Simple_repeat |
scaffold1047 |
6476 |
6504 |
+ |
(TTGT)n |
Simple_repeat |
scaffold1047 |
6823 |
6899 |
+ |
RS1258 |
Unspecified |
scaffold1047 |
8218 |
8245 |
+ |
(A)n |
Simple_repeat |
scaffold1047 |
8348 |
8413 |
+ |
(TTTTTT)n |
Simple_repeat |
scaffold1047 |
9247 |
9280 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
9460 |
9492 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
11218 |
11248 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
18107 |
18148 |
+ |
(ATTCA)n |
Simple_repeat |
scaffold1047 |
18786 |
18824 |
+ |
(TTTGA)n |
Simple_repeat |
scaffold1047 |
19714 |
19746 |
+ |
(ATCACC)n |
Simple_repeat |
scaffold1047 |
20920 |
20951 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
21737 |
21844 |
- |
RS285 |
Unspecified |
scaffold1047 |
22025 |
22117 |
+ |
RS18078 |
Unspecified |
scaffold1047 |
22598 |
22622 |
+ |
(A)n |
Simple_repeat |
scaffold1047 |
23708 |
24076 |
+ |
RS355 |
Unspecified |
scaffold1047 |
24070 |
24932 |
+ |
RS355 |
Unspecified |
scaffold1047 |
24255 |
25073 |
- |
RS294 |
Unspecified |
scaffold1047 |
29985 |
30095 |
- |
RS6694 |
Unspecified |
scaffold1047 |
30039 |
30221 |
+ |
RS8772 |
Unspecified |
scaffold1047 |
30740 |
31387 |
- |
Copia26-PTR_I-int |
LTR/Copia |
scaffold1047 |
31443 |
31625 |
+ |
RS8772 |
Unspecified |
scaffold1047 |
32144 |
32791 |
- |
Copia26-PTR_I-int |
LTR/Copia |
scaffold1047 |
32847 |
32947 |
+ |
RS8772 |
Unspecified |
scaffold1047 |
32952 |
33089 |
+ |
(AGCTGAA)n |
Simple_repeat |
scaffold1047 |
32952 |
33007 |
+ |
(AGCTGAA)n |
Simple_repeat |
scaffold1047 |
32996 |
33306 |
+ |
Copia-2_SL-I |
LTR/Copia |
scaffold1047 |
33066 |
33306 |
+ |
Copia-2_SL-I |
LTR/Copia |
scaffold1047 |
33367 |
36777 |
+ |
Copia-2_SL-I |
LTR/Copia |
scaffold1047 |
36777 |
36842 |
+ |
PL701 |
Unspecified |
scaffold1047 |
36892 |
37050 |
+ |
PL701 |
Unspecified |
scaffold1047 |
37890 |
38131 |
+ |
PL100 |
Unspecified |
scaffold1047 |
38121 |
38215 |
+ |
RS8772 |
Unspecified |
scaffold1047 |
38560 |
38907 |
+ |
RS1363 |
Unspecified |
scaffold1047 |
39020 |
39076 |
+ |
(AATCA)n |
Simple_repeat |
scaffold1047 |
39120 |
39287 |
+ |
RS1362 |
Unspecified |
scaffold1047 |
39484 |
39517 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
40164 |
40492 |
+ |
RS9643 |
Unspecified |
scaffold1047 |
40706 |
40724 |
+ |
(A)n |
Simple_repeat |
scaffold1047 |
42395 |
42449 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold1047 |
42450 |
42508 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold1047 |
44441 |
44506 |
+ |
RS1363 |
Unspecified |
scaffold1047 |
44784 |
44822 |
+ |
(TTGAA)n |
Simple_repeat |
scaffold1047 |
45232 |
45660 |
- |
RS11893 |
Unspecified |
scaffold1047 |
45868 |
46075 |
- |
RS11624 |
Unspecified |
scaffold1047 |
48986 |
49155 |
- |
RS16880 |
Unspecified |
scaffold1047 |
49756 |
49816 |
- |
RS18012 |
Unspecified |
scaffold1047 |
49765 |
49946 |
+ |
RS79 |
Unspecified |
scaffold1047 |
51547 |
51663 |
- |
RS16880 |
Unspecified |
scaffold1047 |
51784 |
51835 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold1047 |
51836 |
51919 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold1047 |
52180 |
52248 |
- |
RS106 |
Unspecified |
scaffold1047 |
53495 |
53616 |
- |
PL3 |
Unspecified |
scaffold1047 |
54093 |
54135 |
+ |
(ATTTGA)n |
Simple_repeat |
scaffold1047 |
54659 |
54737 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
scaffold1047 |
55052 |
55093 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
scaffold1047 |
55096 |
55196 |
- |
RS13929 |
Unspecified |
scaffold1047 |
55279 |
55344 |
+ |
(TTATGAA)n |
Simple_repeat |
scaffold1047 |
56046 |
56225 |
+ |
RS152 |
Unspecified |
scaffold1047 |
56230 |
56413 |
- |
RS503 |
Unspecified |
scaffold1047 |
56525 |
56638 |
- |
RS10 |
Unspecified |
scaffold1047 |
56736 |
56791 |
- |
LTR-2_MX-LTR |
LTR |
scaffold1047 |
57070 |
57111 |
+ |
(A)n |
Simple_repeat |
scaffold1047 |
57205 |
57262 |
+ |
RS8962 |
Unspecified |
scaffold1047 |
57845 |
57908 |
+ |
RS14054 |
Unspecified |
scaffold1047 |
59539 |
59637 |
- |
RS4475 |
Unspecified |
scaffold1047 |
59722 |
59753 |
+ |
(ATTAT)n |
Simple_repeat |
scaffold1047 |
62764 |
62792 |
+ |
(CTT)n |
Simple_repeat |
scaffold1047 |
63012 |
63030 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
63956 |
63982 |
+ |
(TAGAT)n |
Simple_repeat |
scaffold1047 |
68012 |
68053 |
- |
Copia-51_BRa-I |
LTR/Copia |
scaffold1047 |
68845 |
69114 |
+ |
RS1363 |
Unspecified |
scaffold1047 |
69142 |
69298 |
+ |
RS3677 |
Unspecified |
scaffold1047 |
70342 |
70440 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
70506 |
70544 |
+ |
(TCTTTCT)n |
Simple_repeat |
scaffold1047 |
71128 |
71446 |
+ |
RS9643 |
Unspecified |
scaffold1047 |
72360 |
72415 |
+ |
RS1746 |
Unspecified |
scaffold1047 |
72368 |
72486 |
+ |
RS12979 |
Unspecified |
scaffold1047 |
72481 |
72699 |
+ |
(TTTTC)n |
Simple_repeat |
scaffold1047 |
72609 |
72699 |
+ |
(TTTTC)n |
Simple_repeat |
scaffold1047 |
72736 |
72829 |
+ |
RS767 |
Unspecified |
scaffold1047 |
73032 |
73067 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
73129 |
73175 |
+ |
RS6193 |
Unspecified |
scaffold1047 |
73324 |
73630 |
- |
RS14686 |
Unspecified |
scaffold1047 |
77421 |
77797 |
+ |
RS1363 |
Unspecified |
scaffold1047 |
77799 |
78316 |
+ |
RS3677 |
Unspecified |
scaffold1047 |
78174 |
78645 |
- |
RS2217 |
Unspecified |
scaffold1047 |
78847 |
78892 |
+ |
(TCTTCTT)n |
Simple_repeat |
scaffold1047 |
78893 |
78939 |
+ |
(TTTTC)n |
Simple_repeat |
scaffold1047 |
79469 |
79634 |
+ |
hAT-14N2_ZM |
DNA/hAT-Tip100 |
scaffold1047 |
79555 |
79634 |
+ |
hAT-14N2_ZM |
DNA/hAT-Tip100 |
scaffold1047 |
80688 |
80748 |
+ |
(TCT)n |
Simple_repeat |
scaffold1047 |
80929 |
81127 |
+ |
PL785 |
Unspecified |
scaffold1047 |
81451 |
81511 |
+ |
(TCT)n |
Simple_repeat |
scaffold1047 |
82167 |
82200 |
+ |
(GAT)n |
Simple_repeat |
scaffold1047 |
83655 |
83825 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
83808 |
83825 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
83915 |
85899 |
+ |
RS30 |
Unspecified |
scaffold1047 |
86365 |
86407 |
+ |
(ATTCTT)n |
Simple_repeat |
scaffold1047 |
86780 |
86832 |
+ |
(TTTA)n |
Simple_repeat |
scaffold1047 |
87016 |
87390 |
+ |
PL785 |
Unspecified |
scaffold1047 |
87325 |
87400 |
- |
RS1878 |
Unspecified |
scaffold1047 |
87385 |
87489 |
- |
RS3231 |
Unspecified |
scaffold1047 |
87492 |
87637 |
+ |
RS5610 |
Unspecified |
scaffold1047 |
87721 |
87785 |
- |
RS8838 |
Unspecified |
scaffold1047 |
88252 |
88323 |
+ |
(GTT)n |
Simple_repeat |
scaffold1047 |
88340 |
88400 |
+ |
(TTA)n |
Simple_repeat |
scaffold1047 |
88919 |
88982 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
90448 |
90559 |
+ |
RS11963 |
Unspecified |
scaffold1047 |
91923 |
92030 |
+ |
RS11963 |
Unspecified |
scaffold1047 |
92942 |
93005 |
- |
RS12970 |
Unspecified |
scaffold1047 |
93739 |
93790 |
- |
RS12970 |
Unspecified |
scaffold1047 |
94333 |
94495 |
- |
RS11561 |
Unspecified |
scaffold1047 |
95117 |
95459 |
- |
RS8020 |
Unspecified |
scaffold1047 |
95419 |
95468 |
- |
RS2723 |
Unspecified |
scaffold1047 |
96998 |
97040 |
- |
Copia-10_TC-I |
LTR/Copia |
scaffold1047 |
97494 |
99959 |
- |
RS1807 |
Unspecified |
scaffold1047 |
99731 |
99890 |
+ |
RS259 |
Unspecified |
scaffold1047 |
99899 |
101410 |
- |
Copia-38_ST-I |
LTR/Copia |
scaffold1047 |
101894 |
103233 |
- |
Copia-38_ST-I |
LTR/Copia |
scaffold1047 |
103342 |
103971 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold1047 |
104099 |
105475 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold1047 |
104889 |
105214 |
- |
GmCOPIA10_I-int |
LTR/Copia |
scaffold1047 |
105580 |
105621 |
- |
GmCOPIA10_I-int |
LTR/Copia |
scaffold1047 |
105624 |
105666 |
- |
PL485 |
Unspecified |
scaffold1047 |
107546 |
107704 |
+ |
(GTCGG)n |
Simple_repeat |
scaffold1047 |
107723 |
108074 |
- |
PL420 |
Unspecified |
scaffold1047 |
108247 |
108384 |
- |
PL797 |
Unspecified |
scaffold1047 |
108387 |
108527 |
+ |
RS54 |
Unspecified |
scaffold1047 |
108548 |
108589 |
+ |
(AATT)n |
Simple_repeat |
scaffold1047 |
112949 |
112998 |
+ |
(ATAGTTC)n |
Simple_repeat |
scaffold1047 |
113003 |
113383 |
+ |
RS1363 |
Unspecified |
scaffold1047 |
113400 |
113511 |
+ |
RS3677 |
Unspecified |
scaffold1047 |
114734 |
114791 |
+ |
PL271 |
Unspecified |
scaffold1047 |
114824 |
114983 |
- |
RS2987 |
Unspecified |
scaffold1047 |
115440 |
115848 |
- |
RS2174 |
Unspecified |
scaffold1047 |
115441 |
115996 |
+ |
RS3121 |
Unspecified |
scaffold1047 |
115762 |
116690 |
+ |
RS1367 |
Unspecified |
scaffold1047 |
118075 |
118110 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
121443 |
121662 |
- |
RS347 |
Unspecified |
scaffold1047 |
123607 |
123687 |
+ |
(T)n |
Simple_repeat |
scaffold1047 |
123689 |
123811 |
- |
RS5019 |
Unspecified |
scaffold1047 |
123825 |
123851 |
+ |
A-rich |
Low_complexity |
scaffold1047 |
123898 |
123948 |
- |
RS5019 |
Unspecified |
scaffold1047 |
124073 |
124233 |
+ |
RS3940 |
Unspecified |
scaffold1047 |
124281 |
124611 |
- |
RS9299 |
Unspecified |
scaffold1047 |
124453 |
124890 |
- |
RS5019 |
Unspecified |