scaffold10488 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold10488 |
2 |
658 |
- |
RS57 |
Unspecified |
| scaffold10488 |
736 |
840 |
+ |
(TTAATCT)n |
Simple_repeat |
| scaffold10488 |
863 |
1851 |
- |
PL66 |
Unspecified |
| scaffold10488 |
1918 |
1978 |
+ |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold10488 |
2138 |
2195 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold10488 |
3059 |
3100 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold10488 |
3425 |
3487 |
+ |
A-rich |
Low_complexity |
| scaffold10488 |
3642 |
3677 |
+ |
(TCT)n |
Simple_repeat |
| scaffold10488 |
3691 |
3844 |
+ |
(AAC)n |
Simple_repeat |
| scaffold10488 |
3981 |
4051 |
+ |
(CAC)n |
Simple_repeat |
| scaffold10488 |
4056 |
4123 |
+ |
(TCCCTGC)n |
Simple_repeat |
| scaffold10488 |
4212 |
4243 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold10488 |
4552 |
4821 |
- |
RS2963 |
Unspecified |
| scaffold10488 |
4583 |
4821 |
- |
RS3286 |
Unspecified |
| scaffold10488 |
6012 |
6052 |
+ |
(ACA)n |
Simple_repeat |
| scaffold10488 |
6405 |
6474 |
+ |
(CT)n |
Simple_repeat |
| scaffold10488 |
6510 |
6643 |
+ |
RS13871 |
Unspecified |
| scaffold10488 |
6530 |
6681 |
+ |
RS7656 |
Unspecified |
| scaffold10488 |
6770 |
6792 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold10488 |
6807 |
7396 |
- |
RS57 |
Unspecified |
| scaffold10488 |
8325 |
8357 |
+ |
(AAGCATC)n |
Simple_repeat |
| scaffold10488 |
9014 |
9233 |
+ |
RS8 |
Unspecified |
| scaffold10488 |
9284 |
9417 |
+ |
GA-rich |
Low_complexity |
| scaffold10488 |
10645 |
10702 |
+ |
A-rich |
Low_complexity |
| scaffold10488 |
11129 |
11177 |
+ |
(GGT)n |
Simple_repeat |
| scaffold10488 |
11182 |
11212 |
+ |
(CGG)n |
Simple_repeat |
| scaffold10488 |
11405 |
11455 |
+ |
(T)n |
Simple_repeat |
| scaffold10488 |
11516 |
11567 |
+ |
G-rich |
Low_complexity |
| scaffold10488 |
12028 |
12055 |
+ |
(ATA)n |
Simple_repeat |
| scaffold10488 |
13629 |
14033 |
+ |
RS14 |
Unspecified |
| scaffold10488 |
16410 |
16827 |
- |
PL494 |
Unspecified |
| scaffold10488 |
16801 |
16959 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold10488 |
17114 |
17152 |
+ |
(GTA)n |
Simple_repeat |
| scaffold10488 |
17398 |
17486 |
+ |
A-rich |
Low_complexity |
| scaffold10488 |
17584 |
17769 |
+ |
RS372 |
Unspecified |
| scaffold10488 |
17957 |
18023 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold10488 |
18110 |
18787 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold10488 |
19226 |
19915 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold10488 |
21023 |
21222 |
- |
RLG_scDEL_2_1-I |
LTR/Gypsy |
| scaffold10488 |
21464 |
21502 |
- |
Monkey_MA |
LTR/Gypsy |
| scaffold10488 |
21470 |
22359 |
- |
DEA1 |
LTR/Gypsy |
| scaffold10488 |
22429 |
22808 |
+ |
(CACCTGC)n |
Simple_repeat |
| scaffold10488 |
22429 |
22522 |
+ |
(CACCTGC)n |
Simple_repeat |
| scaffold10488 |
22500 |
22808 |
- |
RS2543 |
Unspecified |
| scaffold10488 |
22787 |
22875 |
+ |
RS606 |
Unspecified |
| scaffold10488 |
25365 |
25394 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold10488 |
29988 |
30019 |
+ |
A-rich |
Low_complexity |
| scaffold10488 |
30241 |
30273 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold10488 |
30437 |
30458 |
+ |
(A)n |
Simple_repeat |
| scaffold10488 |
31068 |
31247 |
+ |
RS79 |
Unspecified |
| scaffold10488 |
31559 |
31586 |
+ |
(CAA)n |
Simple_repeat |
| scaffold10488 |
31888 |
32200 |
- |
RS18227 |
Unspecified |
| scaffold10488 |
33495 |
33563 |
+ |
(CTTCATT)n |
Simple_repeat |
| scaffold10488 |
33553 |
33636 |
+ |
(CATCAC)n |
Simple_repeat |
| scaffold10488 |
34233 |
34283 |
+ |
(TGT)n |
Simple_repeat |
| scaffold10488 |
34463 |
34497 |
+ |
(TGTTGGA)n |
Simple_repeat |
| scaffold10488 |
35154 |
35327 |
+ |
RS5068 |
Unspecified |
| scaffold10488 |
35355 |
35509 |
- |
RS5929 |
Unspecified |
| scaffold10488 |
35420 |
35556 |
- |
RS5929 |
Unspecified |
| scaffold10488 |
35431 |
35580 |
- |
RS5929 |
Unspecified |
| scaffold10488 |
35467 |
35604 |
- |
RS5929 |
Unspecified |
| scaffold10488 |
35478 |
35623 |
- |
RS5929 |
Unspecified |
| scaffold10488 |
35614 |
35707 |
- |
PL68 |
Unspecified |
| scaffold10488 |
37137 |
37222 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold10488 |
37228 |
37263 |
+ |
(TTTGGT)n |
Simple_repeat |
| scaffold10488 |
37284 |
38095 |
+ |
PL236 |
Unspecified |
| scaffold10488 |
40284 |
40318 |
+ |
(T)n |
Simple_repeat |
| scaffold10488 |
41669 |
41714 |
+ |
(T)n |
Simple_repeat |
| scaffold10488 |
47028 |
47087 |
+ |
(TT)n |
Simple_repeat |
| scaffold10488 |
47361 |
47403 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold10488 |
47480 |
47606 |
- |
RS1089 |
Unspecified |
| scaffold10488 |
48577 |
48664 |
+ |
(TAATTAA)n |
Simple_repeat |
| scaffold10488 |
50004 |
50169 |
- |
RS509 |
Unspecified |
| scaffold10488 |
53090 |
53203 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold10488 |
53219 |
53371 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold10488 |
53415 |
53466 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold10488 |
55053 |
55124 |
+ |
RS2997 |
Unspecified |
| scaffold10488 |
55109 |
55256 |
+ |
RS8552 |
Unspecified |
| scaffold10488 |
55362 |
55403 |
+ |
(GGT)n |
Simple_repeat |
| scaffold10488 |
55706 |
55732 |
+ |
(A)n |
Simple_repeat |
| scaffold10488 |
55878 |
56313 |
+ |
PL235 |
Unspecified |
| scaffold10488 |
60934 |
60959 |
+ |
(A)n |
Simple_repeat |
| scaffold10488 |
61530 |
61581 |
+ |
(CAAGAAC)n |
Simple_repeat |
| scaffold10488 |
61598 |
61673 |
+ |
(CACAAC)n |
Simple_repeat |
| scaffold10488 |
61653 |
61701 |
+ |
(ATAACA)n |
Simple_repeat |
| scaffold10488 |
62174 |
62223 |
+ |
(ATAG)n |
Simple_repeat |
| scaffold10488 |
62991 |
63037 |
+ |
(T)n |
Simple_repeat |
| scaffold10488 |
66655 |
66700 |
+ |
A-rich |
Low_complexity |
| scaffold10488 |
66961 |
67075 |
- |
RS17916 |
Unspecified |
| scaffold10488 |
67253 |
67323 |
- |
RS17916 |
Unspecified |
| scaffold10488 |
67805 |
67839 |
+ |
A-rich |
Low_complexity |
| scaffold10488 |
67954 |
67972 |
+ |
(T)n |
Simple_repeat |
| scaffold10488 |
68533 |
68567 |
+ |
(TAT)n |
Simple_repeat |
| scaffold10488 |
68623 |
68667 |
+ |
(ACAACC)n |
Simple_repeat |
| scaffold10488 |
68756 |
69209 |
+ |
RS5705 |
Unspecified |
| scaffold10488 |
69208 |
69517 |
+ |
(TA)n |
Simple_repeat |
| scaffold10488 |
69477 |
69517 |
+ |
(TA)n |
Simple_repeat |
| scaffold10488 |
69648 |
69744 |
+ |
EnSpm-5_Mad |
DNA/CMC-EnSpm |
| scaffold10488 |
70282 |
70465 |
- |
RS172 |
Unspecified |
| scaffold10488 |
70466 |
71338 |
- |
RS306 |
Unspecified |
| scaffold10488 |
71957 |
73648 |
- |
PL647 |
Unspecified |