scaffold1058 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1058 |
1 |
294 |
+ |
RS1154 |
Unspecified |
| scaffold1058 |
1 |
255 |
+ |
RS6457 |
Unspecified |
| scaffold1058 |
459 |
520 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1058 |
647 |
912 |
- |
RS69 |
Unspecified |
| scaffold1058 |
1159 |
1511 |
- |
RS69 |
Unspecified |
| scaffold1058 |
1159 |
1456 |
- |
PL784 |
Unspecified |
| scaffold1058 |
1802 |
1972 |
+ |
RS17396 |
Unspecified |
| scaffold1058 |
1999 |
2037 |
+ |
(ACA)n |
Simple_repeat |
| scaffold1058 |
2500 |
2663 |
+ |
RS18128 |
Unspecified |
| scaffold1058 |
3370 |
3719 |
- |
PL604 |
Unspecified |
| scaffold1058 |
3978 |
4146 |
+ |
RS1031 |
Unspecified |
| scaffold1058 |
4357 |
4405 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold1058 |
4501 |
4672 |
- |
PL604 |
Unspecified |
| scaffold1058 |
4623 |
4846 |
+ |
RS6101 |
Unspecified |
| scaffold1058 |
4864 |
5017 |
+ |
RS3202 |
Unspecified |
| scaffold1058 |
5088 |
5204 |
- |
RS285 |
Unspecified |
| scaffold1058 |
5102 |
5208 |
+ |
RS750 |
Unspecified |
| scaffold1058 |
5717 |
5792 |
+ |
GA-rich |
Low_complexity |
| scaffold1058 |
6050 |
6124 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1058 |
6877 |
6941 |
+ |
(TAATCTA)n |
Simple_repeat |
| scaffold1058 |
7124 |
7254 |
+ |
RS16785 |
Unspecified |
| scaffold1058 |
7440 |
7497 |
+ |
(TAATCTA)n |
Simple_repeat |
| scaffold1058 |
7680 |
7810 |
+ |
RS16785 |
Unspecified |
| scaffold1058 |
8286 |
8309 |
+ |
(AT)n |
Simple_repeat |
| scaffold1058 |
8337 |
8381 |
+ |
(AATT)n |
Simple_repeat |
| scaffold1058 |
9378 |
9404 |
+ |
(AT)n |
Simple_repeat |
| scaffold1058 |
10232 |
10329 |
- |
RS63 |
Unspecified |
| scaffold1058 |
10356 |
10404 |
- |
RS1076 |
Unspecified |
| scaffold1058 |
11213 |
11256 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1058 |
11257 |
11281 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1058 |
11976 |
12198 |
- |
RS4 |
Unspecified |
| scaffold1058 |
14151 |
14185 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold1058 |
14197 |
14412 |
- |
RS22 |
Unspecified |
| scaffold1058 |
14421 |
14456 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold1058 |
15616 |
15735 |
- |
RS4475 |
Unspecified |
| scaffold1058 |
18339 |
18393 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold1058 |
19157 |
19189 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
21854 |
21955 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1058 |
21956 |
21971 |
+ |
(ATATAT)n |
Simple_repeat |
| scaffold1058 |
22341 |
22376 |
+ |
(TTG)n |
Simple_repeat |
| scaffold1058 |
22420 |
22454 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1058 |
23039 |
23070 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
23494 |
23519 |
+ |
(TCTG)n |
Simple_repeat |
| scaffold1058 |
24580 |
24598 |
+ |
(A)n |
Simple_repeat |
| scaffold1058 |
24648 |
24683 |
+ |
(T)n |
Simple_repeat |
| scaffold1058 |
24790 |
24842 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1058 |
25271 |
25571 |
- |
RS513 |
Unspecified |
| scaffold1058 |
25582 |
25631 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1058 |
25632 |
25664 |
+ |
(T)n |
Simple_repeat |
| scaffold1058 |
26120 |
26175 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1058 |
26726 |
26769 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
28233 |
28589 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold1058 |
31118 |
31422 |
+ |
PL9 |
Unspecified |
| scaffold1058 |
32349 |
32376 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1058 |
32508 |
32702 |
- |
RS128 |
Unspecified |
| scaffold1058 |
32704 |
32753 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1058 |
33972 |
33992 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1058 |
34591 |
34631 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
35578 |
35877 |
- |
PL81 |
Unspecified |
| scaffold1058 |
35888 |
36158 |
+ |
RS780 |
Unspecified |
| scaffold1058 |
38342 |
38397 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold1058 |
38615 |
38714 |
+ |
RS3989 |
Unspecified |
| scaffold1058 |
39126 |
39210 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold1058 |
39290 |
39352 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1058 |
39353 |
39540 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1058 |
44162 |
44180 |
+ |
(A)n |
Simple_repeat |
| scaffold1058 |
45121 |
45140 |
+ |
(T)n |
Simple_repeat |
| scaffold1058 |
46660 |
46711 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1058 |
46865 |
47420 |
+ |
PL560 |
Unspecified |
| scaffold1058 |
49778 |
50042 |
- |
RS10 |
Unspecified |
| scaffold1058 |
50367 |
50665 |
- |
PL329 |
Unspecified |
| scaffold1058 |
50670 |
50695 |
+ |
(TATG)n |
Simple_repeat |
| scaffold1058 |
50918 |
51098 |
- |
RS1334 |
Unspecified |
| scaffold1058 |
51580 |
51645 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold1058 |
51716 |
51978 |
- |
RS240 |
Unspecified |
| scaffold1058 |
52253 |
52274 |
+ |
(AT)n |
Simple_repeat |
| scaffold1058 |
52358 |
52480 |
- |
RS16888 |
Unspecified |
| scaffold1058 |
53875 |
54242 |
- |
RS98 |
Unspecified |
| scaffold1058 |
55017 |
55059 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
55224 |
55256 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold1058 |
55462 |
55493 |
+ |
(ACGAA)n |
Simple_repeat |
| scaffold1058 |
55586 |
55671 |
+ |
RS1057 |
Unspecified |
| scaffold1058 |
55682 |
55719 |
+ |
(A)n |
Simple_repeat |
| scaffold1058 |
56397 |
56448 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold1058 |
56592 |
56633 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
57576 |
57625 |
+ |
(T)n |
Simple_repeat |
| scaffold1058 |
57819 |
57920 |
+ |
RS16382 |
Unspecified |
| scaffold1058 |
57993 |
58059 |
+ |
RS727 |
Unspecified |
| scaffold1058 |
58350 |
58420 |
+ |
(TGTATA)n |
Simple_repeat |
| scaffold1058 |
59808 |
59830 |
+ |
(A)n |
Simple_repeat |
| scaffold1058 |
60085 |
60181 |
- |
PL622 |
Unspecified |
| scaffold1058 |
60830 |
61042 |
+ |
RS4987 |
Unspecified |
| scaffold1058 |
61204 |
61238 |
- |
RS347 |
Unspecified |
| scaffold1058 |
61239 |
61337 |
- |
RS347 |
Unspecified |
| scaffold1058 |
61317 |
61437 |
- |
RS347 |
Unspecified |
| scaffold1058 |
61751 |
64888 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1058 |
61758 |
62671 |
- |
Copia-70_ST-I |
LTR/Copia |
| scaffold1058 |
63144 |
63930 |
- |
Copia-70_ST-I |
LTR/Copia |
| scaffold1058 |
64389 |
64460 |
- |
Copia-70_ST-I |
LTR/Copia |
| scaffold1058 |
64594 |
64616 |
+ |
(GCT)n |
Simple_repeat |
| scaffold1058 |
65077 |
65121 |
- |
Copia-70_ST-I |
LTR/Copia |
| scaffold1058 |
65504 |
65649 |
- |
ATCopia1I |
LTR/Copia |
| scaffold1058 |
65690 |
66253 |
+ |
RS4987 |
Unspecified |
| scaffold1058 |
66415 |
66449 |
- |
RS16015 |
Unspecified |
| scaffold1058 |
66450 |
66548 |
- |
RS347 |
Unspecified |
| scaffold1058 |
66528 |
66755 |
- |
RS347 |
Unspecified |
| scaffold1058 |
67167 |
67200 |
+ |
(AT)n |
Simple_repeat |
| scaffold1058 |
70433 |
70582 |
+ |
(GTG)n |
Simple_repeat |
| scaffold1058 |
70788 |
70807 |
+ |
(TA)n |
Simple_repeat |
| scaffold1058 |
70808 |
70852 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
72310 |
72343 |
- |
PL40 |
Unspecified |
| scaffold1058 |
73383 |
73424 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1058 |
75462 |
75556 |
+ |
RS4475 |
Unspecified |
| scaffold1058 |
76543 |
76571 |
+ |
(TATA)n |
Simple_repeat |
| scaffold1058 |
77182 |
77365 |
- |
RS18020 |
Unspecified |
| scaffold1058 |
78350 |
78449 |
+ |
RS4475 |
Unspecified |
| scaffold1058 |
80028 |
80072 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1058 |
80418 |
80424 |
+ |
(TATATA)n |
Simple_repeat |
| scaffold1058 |
80425 |
80474 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
80475 |
80490 |
+ |
(TATATA)n |
Simple_repeat |
| scaffold1058 |
81986 |
82055 |
- |
RS726 |
Unspecified |
| scaffold1058 |
82056 |
82099 |
- |
RS1367 |
Unspecified |
| scaffold1058 |
82189 |
82447 |
+ |
RS2314 |
Unspecified |
| scaffold1058 |
82824 |
83390 |
- |
RS1495 |
Unspecified |
| scaffold1058 |
83429 |
83722 |
- |
RS1495 |
Unspecified |
| scaffold1058 |
84356 |
84399 |
+ |
(TATTAGA)n |
Simple_repeat |
| scaffold1058 |
84356 |
84481 |
+ |
(TATTAGA)n |
Simple_repeat |
| scaffold1058 |
84391 |
84481 |
- |
RS726 |
Unspecified |
| scaffold1058 |
84474 |
84599 |
- |
RS726 |
Unspecified |
| scaffold1058 |
84693 |
84731 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold1058 |
84894 |
85041 |
+ |
RS1082 |
Unspecified |
| scaffold1058 |
85407 |
85423 |
+ |
(T)n |
Simple_repeat |
| scaffold1058 |
86054 |
86085 |
+ |
(A)n |
Simple_repeat |
| scaffold1058 |
87866 |
87900 |
+ |
(GAAAAT)n |
Simple_repeat |
| scaffold1058 |
88296 |
88793 |
+ |
RS10280 |
Unspecified |
| scaffold1058 |
88972 |
89231 |
- |
RS936 |
Unspecified |
| scaffold1058 |
89652 |
89809 |
- |
RS3094 |
Unspecified |
| scaffold1058 |
90668 |
90805 |
- |
PL82 |
Unspecified |
| scaffold1058 |
91008 |
91035 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
91103 |
91646 |
+ |
RS910 |
Unspecified |
| scaffold1058 |
91959 |
92018 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold1058 |
92382 |
92557 |
+ |
PL292 |
Unspecified |
| scaffold1058 |
92753 |
92810 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
93380 |
93441 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold1058 |
93817 |
93885 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold1058 |
93909 |
94163 |
+ |
RS5248 |
Unspecified |
| scaffold1058 |
94401 |
94444 |
+ |
(GAT)n |
Simple_repeat |
| scaffold1058 |
94565 |
94754 |
- |
RS5248 |
Unspecified |
| scaffold1058 |
95976 |
96194 |
+ |
RS12393 |
Unspecified |
| scaffold1058 |
96414 |
96689 |
+ |
RS13744 |
Unspecified |
| scaffold1058 |
97608 |
97737 |
+ |
RS13945 |
Unspecified |
| scaffold1058 |
100627 |
100694 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold1058 |
100771 |
100947 |
+ |
RS12684 |
Unspecified |
| scaffold1058 |
105461 |
105495 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold1058 |
105808 |
105844 |
+ |
(TACTCAC)n |
Simple_repeat |
| scaffold1058 |
105852 |
105918 |
+ |
(A)n |
Simple_repeat |
| scaffold1058 |
107411 |
107629 |
+ |
RS12393 |
Unspecified |
| scaffold1058 |
107863 |
108137 |
+ |
RS13744 |
Unspecified |
| scaffold1058 |
108921 |
109050 |
+ |
RS13945 |
Unspecified |
| scaffold1058 |
110525 |
110556 |
+ |
(CTT)n |
Simple_repeat |
| scaffold1058 |
110712 |
110761 |
+ |
(ACC)n |
Simple_repeat |
| scaffold1058 |
110960 |
111170 |
+ |
RS7755 |
Unspecified |
| scaffold1058 |
111180 |
111240 |
+ |
(GGT)n |
Simple_repeat |
| scaffold1058 |
111452 |
112586 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold1058 |
112938 |
112981 |
+ |
(GGCTGGCC)n |
Simple_repeat |
| scaffold1058 |
113217 |
113272 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1058 |
114257 |
114360 |
- |
hAT-1_STu |
DNA/hAT-Tip100 |
| scaffold1058 |
114901 |
114937 |
+ |
(T)n |
Simple_repeat |
| scaffold1058 |
115413 |
115584 |
+ |
RS1261 |
Unspecified |
| scaffold1058 |
115413 |
115540 |
+ |
RS3668 |
Unspecified |
| scaffold1058 |
116204 |
116383 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1058 |
116610 |
116633 |
+ |
(TA)n |
Simple_repeat |
| scaffold1058 |
118128 |
118145 |
+ |
(A)n |
Simple_repeat |
| scaffold1058 |
120097 |
120305 |
+ |
RS10259 |
Unspecified |
| scaffold1058 |
120525 |
121359 |
+ |
RS8562 |
Unspecified |
| scaffold1058 |
122404 |
122545 |
+ |
(TATAAGCA)n |
Simple_repeat |
| scaffold1058 |
124072 |
124131 |
+ |
Gypsy-52_BD-I |
LTR/Gypsy |
| scaffold1058 |
124442 |
124515 |
+ |
(CTCATTT)n |
Simple_repeat |
| scaffold1058 |
124706 |
124896 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold1058 |
125730 |
125766 |
+ |
(TTGTTGA)n |
Simple_repeat |
| scaffold1058 |
126272 |
126328 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold1058 |
126925 |
127011 |
+ |
Gypsy-26_ST-I |
LTR/Gypsy |
| scaffold1058 |
127606 |
127796 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold1058 |
128741 |
128777 |
+ |
(TTGTTGA)n |
Simple_repeat |
| scaffold1058 |
129314 |
129338 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1058 |
129386 |
129817 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold1058 |
129639 |
129764 |
- |
Gypsy-78-I_ZM |
LTR/Gypsy |
| scaffold1058 |
129839 |
129999 |
- |
Gypsy18-VV_I-int |
LTR/Gypsy |
| scaffold1058 |
130542 |
130566 |
+ |
(T)n |
Simple_repeat |
| scaffold1058 |
131090 |
131122 |
+ |
(ACAAAC)n |
Simple_repeat |
| scaffold1058 |
131238 |
131284 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1058 |
131697 |
131733 |
+ |
(AT)n |
Simple_repeat |
| scaffold1058 |
131732 |
132006 |
+ |
RS438 |
Unspecified |
| scaffold1058 |
132026 |
132167 |
+ |
A-rich |
Low_complexity |
| scaffold1058 |
132185 |
132215 |
+ |
(T)n |
Simple_repeat |
| scaffold1058 |
133343 |
133427 |
+ |
(TTATAAT)n |
Simple_repeat |
| scaffold1058 |
133575 |
134076 |
+ |
PL250 |
Unspecified |