scaffold11279 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11279 |
1 |
106 |
- |
PL480 |
Unspecified |
| scaffold11279 |
185 |
346 |
+ |
PL850 |
Unspecified |
| scaffold11279 |
353 |
395 |
+ |
(A)n |
Simple_repeat |
| scaffold11279 |
567 |
604 |
+ |
A-rich |
Low_complexity |
| scaffold11279 |
1711 |
1751 |
+ |
A-rich |
Low_complexity |
| scaffold11279 |
2117 |
3513 |
+ |
RS1172 |
Unspecified |
| scaffold11279 |
3375 |
3620 |
- |
RS581 |
Unspecified |
| scaffold11279 |
3619 |
3908 |
- |
RS215 |
Unspecified |
| scaffold11279 |
3911 |
4388 |
+ |
RS637 |
Unspecified |
| scaffold11279 |
5805 |
5821 |
+ |
(T)n |
Simple_repeat |
| scaffold11279 |
6051 |
6086 |
+ |
(ATTATC)n |
Simple_repeat |
| scaffold11279 |
6262 |
6333 |
+ |
Copia-70_ST-I |
LTR/Copia |
| scaffold11279 |
6503 |
6708 |
- |
RS28 |
Unspecified |
| scaffold11279 |
7209 |
7254 |
- |
RS463 |
Unspecified |
| scaffold11279 |
7266 |
7318 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11279 |
7319 |
7512 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11279 |
7669 |
7695 |
+ |
(T)n |
Simple_repeat |
| scaffold11279 |
7735 |
8163 |
- |
PL3 |
Unspecified |
| scaffold11279 |
8376 |
8696 |
+ |
RS1456 |
Unspecified |
| scaffold11279 |
8717 |
8884 |
- |
RS1194 |
Unspecified |
| scaffold11279 |
9343 |
9379 |
+ |
(TTCATT)n |
Simple_repeat |
| scaffold11279 |
10212 |
10257 |
- |
hAT-5_STu |
DNA/hAT-Tip100 |
| scaffold11279 |
10859 |
10902 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold11279 |
11099 |
11138 |
- |
RS2403 |
Unspecified |
| scaffold11279 |
11254 |
11401 |
+ |
RS560 |
Unspecified |
| scaffold11279 |
11615 |
11910 |
- |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold11279 |
12554 |
12647 |
+ |
RS3146 |
Unspecified |
| scaffold11279 |
12775 |
12816 |
+ |
(ATTCTCAT)n |
Simple_repeat |
| scaffold11279 |
12872 |
12928 |
+ |
(ACA)n |
Simple_repeat |
| scaffold11279 |
13490 |
13872 |
- |
RS458 |
Unspecified |
| scaffold11279 |
14305 |
14472 |
- |
RS365 |
Unspecified |
| scaffold11279 |
14471 |
14697 |
+ |
RS1906 |
Unspecified |
| scaffold11279 |
15738 |
15760 |
+ |
(T)n |
Simple_repeat |
| scaffold11279 |
16175 |
16255 |
+ |
A-rich |
Low_complexity |
| scaffold11279 |
16457 |
16619 |
+ |
RS3982 |
Unspecified |
| scaffold11279 |
16663 |
16691 |
+ |
(GCTGG)n |
Simple_repeat |
| scaffold11279 |
17935 |
18258 |
+ |
RS1760 |
Unspecified |
| scaffold11279 |
19815 |
19996 |
+ |
RS492 |
Unspecified |
| scaffold11279 |
20186 |
20231 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold11279 |
20394 |
20547 |
+ |
RS152 |
Unspecified |
| scaffold11279 |
20563 |
20649 |
- |
RS241 |
Unspecified |
| scaffold11279 |
20563 |
20670 |
- |
RS503 |
Unspecified |
| scaffold11279 |
20835 |
20880 |
+ |
A-rich |
Low_complexity |
| scaffold11279 |
20974 |
20998 |
+ |
(ATC)n |
Simple_repeat |
| scaffold11279 |
21330 |
21342 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold11279 |
21343 |
21373 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold11279 |
21374 |
21382 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold11279 |
21923 |
22024 |
+ |
RS15113 |
Unspecified |
| scaffold11279 |
21934 |
22025 |
- |
RS3146 |
Unspecified |
| scaffold11279 |
25231 |
25706 |
- |
Copia-80_PT-I |
LTR/Copia |
| scaffold11279 |
25231 |
25304 |
- |
Copia-80_PT-I |
LTR/Copia |
| scaffold11279 |
25276 |
25706 |
- |
PL179 |
Unspecified |
| scaffold11279 |
25719 |
25827 |
+ |
RS2100 |
Unspecified |
| scaffold11279 |
25742 |
26214 |
+ |
RS2015 |
Unspecified |
| scaffold11279 |
26218 |
26467 |
- |
RS138 |
Unspecified |
| scaffold11279 |
27048 |
27160 |
- |
RS8816 |
Unspecified |
| scaffold11279 |
27204 |
27438 |
- |
RS4000 |
Unspecified |
| scaffold11279 |
27235 |
27839 |
- |
RS9903 |
Unspecified |
| scaffold11279 |
30725 |
30741 |
+ |
(T)n |
Simple_repeat |
| scaffold11279 |
35885 |
36544 |
+ |
PL25 |
Unspecified |
| scaffold11279 |
38334 |
38374 |
+ |
A-rich |
Low_complexity |
| scaffold11279 |
38500 |
38612 |
+ |
RS142 |
Unspecified |
| scaffold11279 |
39993 |
40167 |
+ |
RS1694 |
Unspecified |
| scaffold11279 |
40219 |
40288 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11279 |
40298 |
40435 |
- |
EnSpm-5_Mad |
DNA/CMC-EnSpm |
| scaffold11279 |
40437 |
41078 |
- |
RS306 |
Unspecified |
| scaffold11279 |
41077 |
41346 |
- |
RS1 |
Unspecified |
| scaffold11279 |
41257 |
41357 |
+ |
RS17699 |
Unspecified |
| scaffold11279 |
41344 |
41468 |
- |
RS306 |
Unspecified |
| scaffold11279 |
41464 |
41667 |
- |
RS28 |
Unspecified |
| scaffold11279 |
41666 |
42019 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold11279 |
41992 |
42019 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold11279 |
42051 |
42166 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold11279 |
44738 |
44787 |
+ |
RS548 |
Unspecified |
| scaffold11279 |
44992 |
45149 |
+ |
RS10322 |
Unspecified |
| scaffold11279 |
45558 |
45671 |
+ |
RS5318 |
Unspecified |
| scaffold11279 |
46161 |
46239 |
+ |
RS5318 |
Unspecified |
| scaffold11279 |
46301 |
46406 |
+ |
RS7328 |
Unspecified |
| scaffold11279 |
46616 |
46692 |
+ |
(ATTAGG)n |
Simple_repeat |
| scaffold11279 |
46762 |
46896 |
+ |
RS1614 |
Unspecified |
| scaffold11279 |
46816 |
46964 |
- |
RS3039 |
Unspecified |
| scaffold11279 |
47393 |
47668 |
- |
RS1010 |
Unspecified |
| scaffold11279 |
51137 |
51169 |
+ |
(AATTTTA)n |
Simple_repeat |
| scaffold11279 |
51238 |
51466 |
- |
RS4 |
Unspecified |
| scaffold11279 |
51805 |
52068 |
- |
RS356 |
Unspecified |
| scaffold11279 |
52712 |
52769 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold11279 |
53828 |
53854 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold11279 |
53994 |
54030 |
+ |
(AATT)n |
Simple_repeat |
| scaffold11279 |
54162 |
54195 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold11279 |
54732 |
54765 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold11279 |
55053 |
55272 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11279 |
55567 |
55615 |
+ |
RS165 |
Unspecified |
| scaffold11279 |
56718 |
56820 |
- |
PL271 |
Unspecified |
| scaffold11279 |
58311 |
58570 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11279 |
58783 |
58831 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11279 |
59152 |
59220 |
+ |
(A)n |
Simple_repeat |
| scaffold11279 |
59321 |
59372 |
+ |
GA-rich |
Low_complexity |
| scaffold11279 |
59373 |
59389 |
+ |
(AGAGTG)n |
Simple_repeat |
| scaffold11279 |
59660 |
59713 |
+ |
(TTTTTAC)n |
Simple_repeat |
| scaffold11279 |
60939 |
60963 |
+ |
(A)n |
Simple_repeat |
| scaffold11279 |
60975 |
61016 |
+ |
(CATA)n |
Simple_repeat |
| scaffold11279 |
62074 |
62110 |
+ |
GA-rich |
Low_complexity |
| scaffold11279 |
62462 |
62486 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11279 |
63175 |
63206 |
+ |
(GAC)n |
Simple_repeat |
| scaffold11279 |
63348 |
63371 |
+ |
(TA)n |
Simple_repeat |
| scaffold11279 |
63582 |
63604 |
+ |
(AGTC)n |
Simple_repeat |
| scaffold11279 |
63634 |
63676 |
+ |
G-rich |
Low_complexity |
| scaffold11279 |
64044 |
64116 |
+ |
(ATT)n |
Simple_repeat |
| scaffold11279 |
65297 |
65341 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold11279 |
66251 |
66494 |
+ |
RS4 |
Unspecified |
| scaffold11279 |
66670 |
66828 |
- |
RS16831 |
Unspecified |
| scaffold11279 |
67135 |
67170 |
+ |
(TACATAT)n |
Simple_repeat |
| scaffold11279 |
68026 |
68043 |
+ |
(T)n |
Simple_repeat |
| scaffold11279 |
68461 |
68609 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11279 |
68568 |
68618 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold11279 |
72230 |
72262 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold11279 |
72666 |
72713 |
+ |
(ATC)n |
Simple_repeat |