scaffold11346 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11346 |
1 |
61 |
+ |
RS4133 |
Unspecified |
| scaffold11346 |
231 |
319 |
+ |
GA-rich |
Low_complexity |
| scaffold11346 |
439 |
557 |
+ |
RS11546 |
Unspecified |
| scaffold11346 |
870 |
1024 |
+ |
RS1746 |
Unspecified |
| scaffold11346 |
1020 |
1062 |
- |
RS1746 |
Unspecified |
| scaffold11346 |
1020 |
1078 |
+ |
RS1646 |
Unspecified |
| scaffold11346 |
1466 |
1502 |
+ |
(GTGA)n |
Simple_repeat |
| scaffold11346 |
2077 |
2200 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold11346 |
2201 |
2243 |
+ |
hAT-23_ZM |
DNA/hAT-Ac |
| scaffold11346 |
7904 |
7976 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold11346 |
8318 |
8703 |
- |
PL595 |
Unspecified |
| scaffold11346 |
8414 |
8442 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold11346 |
8706 |
8753 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold11346 |
9446 |
9487 |
+ |
(TTTTGTA)n |
Simple_repeat |
| scaffold11346 |
9818 |
9824 |
+ |
(AAAAATA)n |
Simple_repeat |
| scaffold11346 |
9825 |
9850 |
+ |
(A)n |
Simple_repeat |
| scaffold11346 |
9864 |
9924 |
- |
RS17658 |
Unspecified |
| scaffold11346 |
10241 |
10283 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
10344 |
10385 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
10416 |
10445 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
10447 |
10546 |
- |
RS580 |
Unspecified |
| scaffold11346 |
10648 |
12313 |
- |
RS27 |
Unspecified |
| scaffold11346 |
11546 |
12614 |
+ |
RS13278 |
Unspecified |
| scaffold11346 |
12273 |
13187 |
- |
PL706 |
Unspecified |
| scaffold11346 |
13187 |
13287 |
- |
RS7942 |
Unspecified |
| scaffold11346 |
13336 |
13402 |
+ |
(TAATTTT)n |
Simple_repeat |
| scaffold11346 |
13665 |
13858 |
- |
RS580 |
Unspecified |
| scaffold11346 |
17480 |
17516 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
18568 |
18610 |
+ |
(TC)n |
Simple_repeat |
| scaffold11346 |
18659 |
18708 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold11346 |
18709 |
18721 |
+ |
(TTGTATGA)n |
Simple_repeat |
| scaffold11346 |
21397 |
21463 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
21948 |
22067 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold11346 |
23386 |
23423 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
25321 |
25387 |
+ |
(TAT)n |
Simple_repeat |
| scaffold11346 |
25359 |
25388 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
25968 |
26011 |
+ |
(AATATTT)n |
Simple_repeat |
| scaffold11346 |
26345 |
26421 |
- |
RS15534 |
Unspecified |
| scaffold11346 |
28211 |
28267 |
+ |
(TGT)n |
Simple_repeat |
| scaffold11346 |
29501 |
29563 |
+ |
G-rich |
Low_complexity |
| scaffold11346 |
29585 |
29632 |
+ |
(CGGGT)n |
Simple_repeat |
| scaffold11346 |
29950 |
30032 |
+ |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold11346 |
30073 |
30125 |
- |
HAT-9_Mad |
DNA/hAT-Ac |
| scaffold11346 |
30731 |
30769 |
+ |
(GTT)n |
Simple_repeat |
| scaffold11346 |
30856 |
30998 |
+ |
RS185 |
Unspecified |
| scaffold11346 |
32521 |
32546 |
+ |
(GAGAG)n |
Simple_repeat |
| scaffold11346 |
32737 |
32974 |
+ |
RS4 |
Unspecified |
| scaffold11346 |
33656 |
33732 |
+ |
(AATT)n |
Simple_repeat |
| scaffold11346 |
34715 |
34741 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold11346 |
35188 |
35223 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold11346 |
35224 |
35237 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold11346 |
35969 |
36000 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
36670 |
36708 |
+ |
(ATCCAT)n |
Simple_repeat |
| scaffold11346 |
37615 |
37918 |
+ |
RS42 |
Unspecified |
| scaffold11346 |
37939 |
38000 |
+ |
(AATT)n |
Simple_repeat |
| scaffold11346 |
38037 |
38132 |
+ |
(TTTTCT)n |
Simple_repeat |
| scaffold11346 |
38662 |
38678 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
38759 |
38786 |
+ |
(TTG)n |
Simple_repeat |
| scaffold11346 |
40733 |
40764 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
43493 |
43515 |
+ |
(ACC)n |
Simple_repeat |
| scaffold11346 |
45083 |
45101 |
+ |
(A)n |
Simple_repeat |
| scaffold11346 |
45217 |
45238 |
+ |
(CTT)n |
Simple_repeat |
| scaffold11346 |
45416 |
45451 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold11346 |
45600 |
45630 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
45726 |
45791 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
46395 |
46504 |
- |
RS4475 |
Unspecified |
| scaffold11346 |
46793 |
46835 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
46968 |
47139 |
+ |
RS15527 |
Unspecified |
| scaffold11346 |
47205 |
47277 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold11346 |
47489 |
47540 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
47923 |
47956 |
- |
PL573 |
Unspecified |
| scaffold11346 |
48101 |
48129 |
+ |
(ATATG)n |
Simple_repeat |
| scaffold11346 |
48697 |
49155 |
- |
PL573 |
Unspecified |
| scaffold11346 |
49157 |
49345 |
- |
RS428 |
Unspecified |
| scaffold11346 |
49344 |
49587 |
+ |
MTIS112A |
DNA/PIF-Harbinger |
| scaffold11346 |
49574 |
49745 |
+ |
RS15527 |
Unspecified |
| scaffold11346 |
49811 |
49882 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold11346 |
50103 |
50139 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
50408 |
50467 |
+ |
(TTCAGCTCAG)n |
Simple_repeat |
| scaffold11346 |
50497 |
50580 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold11346 |
52111 |
52193 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11346 |
52225 |
52332 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold11346 |
53684 |
53768 |
+ |
hAT-13_VVi |
DNA/hAT-Ac |
| scaffold11346 |
53888 |
54080 |
- |
PL288 |
Unspecified |
| scaffold11346 |
54313 |
54403 |
- |
RS509 |
Unspecified |
| scaffold11346 |
54407 |
54451 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
54516 |
54773 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11346 |
54667 |
54790 |
+ |
(AAATG)n |
Simple_repeat |
| scaffold11346 |
55348 |
55600 |
- |
RS586 |
Unspecified |
| scaffold11346 |
55921 |
56056 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
55921 |
55990 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
55975 |
56056 |
+ |
PL966 |
Unspecified |
| scaffold11346 |
56009 |
56056 |
- |
PL850 |
Unspecified |
| scaffold11346 |
56058 |
56389 |
- |
PL677 |
Unspecified |
| scaffold11346 |
56383 |
56492 |
- |
PL573 |
Unspecified |
| scaffold11346 |
56561 |
56702 |
+ |
RS115 |
Unspecified |
| scaffold11346 |
57114 |
57181 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold11346 |
57264 |
57290 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
57355 |
57612 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11346 |
57506 |
57629 |
+ |
(AAATG)n |
Simple_repeat |
| scaffold11346 |
58187 |
58439 |
- |
RS586 |
Unspecified |
| scaffold11346 |
58760 |
58829 |
+ |
A-rich |
Low_complexity |
| scaffold11346 |
58853 |
59190 |
- |
PL469 |
Unspecified |
| scaffold11346 |
60733 |
60787 |
+ |
(TT)n |
Simple_repeat |
| scaffold11346 |
60864 |
60888 |
+ |
(T)n |
Simple_repeat |
| scaffold11346 |
60944 |
61164 |
+ |
RS37 |
Unspecified |
| scaffold11346 |
61163 |
61439 |
+ |
PL834 |
Unspecified |