scaffold11623 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold11623 |
498 |
531 |
- |
Copia7-ZM_LTR |
LTR/Copia |
| scaffold11623 |
2185 |
2423 |
+ |
PL898 |
Unspecified |
| scaffold11623 |
3047 |
3359 |
+ |
RS23 |
Unspecified |
| scaffold11623 |
3132 |
3535 |
+ |
RS23 |
Unspecified |
| scaffold11623 |
3246 |
4233 |
+ |
RS23 |
Unspecified |
| scaffold11623 |
4423 |
5666 |
+ |
RS23 |
Unspecified |
| scaffold11623 |
5103 |
5984 |
+ |
PL706 |
Unspecified |
| scaffold11623 |
6562 |
6612 |
+ |
DNA9-19_Mad |
DNA/MULE-MuDR |
| scaffold11623 |
7190 |
7951 |
+ |
RS27 |
Unspecified |
| scaffold11623 |
7321 |
9005 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold11623 |
7968 |
8302 |
+ |
PL530 |
Unspecified |
| scaffold11623 |
8300 |
9247 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold11623 |
8424 |
8532 |
+ |
MuDR-11_SBi |
DNA/MULE-MuDR |
| scaffold11623 |
8693 |
8859 |
+ |
MUMT |
DNA/MULE-MuDR |
| scaffold11623 |
9837 |
9970 |
- |
RS2056 |
Unspecified |
| scaffold11623 |
10200 |
10303 |
- |
RS8222 |
Unspecified |
| scaffold11623 |
10537 |
10652 |
+ |
RS6035 |
Unspecified |
| scaffold11623 |
11654 |
11782 |
- |
RS8222 |
Unspecified |
| scaffold11623 |
12588 |
12606 |
+ |
(A)n |
Simple_repeat |
| scaffold11623 |
12859 |
12901 |
+ |
(ATCTA)n |
Simple_repeat |
| scaffold11623 |
13116 |
13368 |
+ |
RS5248 |
Unspecified |
| scaffold11623 |
13478 |
13742 |
+ |
RS7510 |
Unspecified |
| scaffold11623 |
13568 |
13781 |
+ |
RS839 |
Unspecified |
| scaffold11623 |
13781 |
14448 |
+ |
PL171 |
Unspecified |
| scaffold11623 |
15141 |
15161 |
+ |
(A)n |
Simple_repeat |
| scaffold11623 |
15831 |
15852 |
+ |
(A)n |
Simple_repeat |
| scaffold11623 |
15853 |
16124 |
+ |
RS1 |
Unspecified |
| scaffold11623 |
16093 |
16146 |
+ |
RS17699 |
Unspecified |
| scaffold11623 |
16161 |
16188 |
+ |
(A)n |
Simple_repeat |
| scaffold11623 |
16895 |
16930 |
+ |
(TGAATT)n |
Simple_repeat |
| scaffold11623 |
17686 |
17805 |
- |
RS5437 |
Unspecified |
| scaffold11623 |
17710 |
17822 |
+ |
RS7601 |
Unspecified |
| scaffold11623 |
17857 |
18135 |
+ |
RS1016 |
Unspecified |
| scaffold11623 |
18490 |
18561 |
+ |
(AGTTTC)n |
Simple_repeat |
| scaffold11623 |
18689 |
18788 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold11623 |
18809 |
18917 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold11623 |
19219 |
19375 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold11623 |
19534 |
19697 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold11623 |
19708 |
19873 |
- |
RS12066 |
Unspecified |
| scaffold11623 |
20231 |
20270 |
+ |
G-rich |
Low_complexity |
| scaffold11623 |
20859 |
20898 |
+ |
(CCACCT)n |
Simple_repeat |
| scaffold11623 |
20904 |
20954 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold11623 |
20998 |
21058 |
+ |
(ATTTAAG)n |
Simple_repeat |
| scaffold11623 |
21696 |
21996 |
+ |
RS513 |
Unspecified |
| scaffold11623 |
22049 |
22149 |
- |
RS7678 |
Unspecified |
| scaffold11623 |
22258 |
22284 |
+ |
(TCAT)n |
Simple_repeat |
| scaffold11623 |
22396 |
22430 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold11623 |
22490 |
22555 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold11623 |
23026 |
23135 |
- |
Copia20-VV_I-int |
LTR/Copia |
| scaffold11623 |
23137 |
23225 |
+ |
RS545 |
Unspecified |
| scaffold11623 |
23406 |
23588 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold11623 |
23599 |
23756 |
- |
RS12066 |
Unspecified |
| scaffold11623 |
23764 |
23849 |
- |
RS898 |
Unspecified |
| scaffold11623 |
23864 |
23930 |
+ |
G-rich |
Low_complexity |
| scaffold11623 |
24264 |
24340 |
- |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
| scaffold11623 |
24483 |
24514 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold11623 |
24966 |
24992 |
+ |
(CATCA)n |
Simple_repeat |
| scaffold11623 |
25083 |
25112 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold11623 |
25172 |
25233 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold11623 |
26271 |
26302 |
+ |
(TTC)n |
Simple_repeat |
| scaffold11623 |
27665 |
27692 |
+ |
(T)n |
Simple_repeat |
| scaffold11623 |
28232 |
28250 |
+ |
(T)n |
Simple_repeat |
| scaffold11623 |
30963 |
30987 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold11623 |
31477 |
31506 |
+ |
(T)n |
Simple_repeat |
| scaffold11623 |
34627 |
34668 |
+ |
(CCGCC)n |
Simple_repeat |
| scaffold11623 |
35127 |
35179 |
- |
RS15316 |
Unspecified |
| scaffold11623 |
35348 |
35777 |
- |
RS458 |
Unspecified |
| scaffold11623 |
36240 |
36284 |
+ |
(AATAAA)n |
Simple_repeat |
| scaffold11623 |
36393 |
36443 |
+ |
(TC)n |
Simple_repeat |
| scaffold11623 |
36587 |
36623 |
+ |
(ATGATG)n |
Simple_repeat |
| scaffold11623 |
36685 |
36721 |
+ |
(TTGTTTG)n |
Simple_repeat |
| scaffold11623 |
36965 |
36981 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11623 |
38644 |
38670 |
+ |
(TTGGG)n |
Simple_repeat |
| scaffold11623 |
39044 |
39068 |
+ |
(T)n |
Simple_repeat |
| scaffold11623 |
39069 |
39093 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold11623 |
39248 |
39307 |
+ |
(TAATTG)n |
Simple_repeat |
| scaffold11623 |
39355 |
39453 |
+ |
(ATTTTTA)n |
Simple_repeat |
| scaffold11623 |
39452 |
39503 |
+ |
A-rich |
Low_complexity |
| scaffold11623 |
39514 |
39643 |
- |
RS2090 |
Unspecified |
| scaffold11623 |
39542 |
39639 |
- |
RS2764 |
Unspecified |
| scaffold11623 |
40421 |
40442 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold11623 |
40911 |
40955 |
+ |
(AATAAA)n |
Simple_repeat |
| scaffold11623 |
41064 |
41114 |
+ |
(TC)n |
Simple_repeat |
| scaffold11623 |
41258 |
41294 |
+ |
(ATGATG)n |
Simple_repeat |
| scaffold11623 |
41356 |
41392 |
+ |
(TTGTTTG)n |
Simple_repeat |
| scaffold11623 |
41636 |
41652 |
+ |
(AAT)n |
Simple_repeat |
| scaffold11623 |
43315 |
43341 |
+ |
(TTGGG)n |
Simple_repeat |
| scaffold11623 |
45567 |
45592 |
+ |
(T)n |
Simple_repeat |
| scaffold11623 |
46139 |
46267 |
- |
RS580 |
Unspecified |
| scaffold11623 |
46363 |
46398 |
+ |
A-rich |
Low_complexity |
| scaffold11623 |
46587 |
46675 |
+ |
RS174 |
Unspecified |
| scaffold11623 |
46837 |
46959 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold11623 |
47430 |
47469 |
+ |
(A)n |
Simple_repeat |
| scaffold11623 |
47666 |
48100 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold11623 |
47805 |
47862 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11623 |
50955 |
50989 |
+ |
(ATTCAA)n |
Simple_repeat |
| scaffold11623 |
51543 |
51689 |
+ |
RS4 |
Unspecified |
| scaffold11623 |
51677 |
51812 |
+ |
RS3637 |
Unspecified |
| scaffold11623 |
52122 |
52146 |
+ |
(A)n |
Simple_repeat |
| scaffold11623 |
52168 |
52453 |
+ |
(ACC)n |
Simple_repeat |
| scaffold11623 |
52399 |
52453 |
+ |
(ACC)n |
Simple_repeat |
| scaffold11623 |
52763 |
52851 |
- |
RS3427 |
Unspecified |
| scaffold11623 |
52779 |
52881 |
+ |
RS4 |
Unspecified |
| scaffold11623 |
54274 |
54387 |
- |
RS1774 |
Unspecified |
| scaffold11623 |
54533 |
54591 |
+ |
RS2753 |
Unspecified |
| scaffold11623 |
54579 |
54801 |
+ |
PL727 |
Unspecified |
| scaffold11623 |
54843 |
54934 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold11623 |
54910 |
54983 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold11623 |
55188 |
55289 |
+ |
RS3989 |
Unspecified |
| scaffold11623 |
55628 |
55975 |
- |
RS8 |
Unspecified |
| scaffold11623 |
57437 |
57694 |
- |
RS237 |
Unspecified |
| scaffold11623 |
57722 |
57934 |
- |
RS6304 |
Unspecified |
| scaffold11623 |
58048 |
58320 |
+ |
RS9695 |
Unspecified |
| scaffold11623 |
58356 |
58458 |
+ |
RS8790 |
Unspecified |
| scaffold11623 |
60157 |
60195 |
+ |
(CAC)n |
Simple_repeat |
| scaffold11623 |
60765 |
60793 |
+ |
(CCA)n |
Simple_repeat |
| scaffold11623 |
64622 |
64654 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold11623 |
65200 |
65363 |
+ |
(CCA)n |
Simple_repeat |
| scaffold11623 |
65937 |
66044 |
- |
RS3380 |
Unspecified |
| scaffold11623 |
65954 |
66201 |
+ |
RS376 |
Unspecified |
| scaffold11623 |
66423 |
66489 |
+ |
A-rich |
Low_complexity |
| scaffold11623 |
67439 |
67612 |
- |
PL582 |
Unspecified |
| scaffold11623 |
67461 |
67907 |
- |
RS2034 |
Unspecified |
| scaffold11623 |
68823 |
69033 |
+ |
PL501 |
Unspecified |
| scaffold11623 |
69408 |
69672 |
+ |
RS106 |
Unspecified |
| scaffold11623 |
69850 |
69875 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold11623 |
70125 |
70380 |
- |
RS1 |
Unspecified |
| scaffold11623 |
70379 |
70457 |
- |
RS1172 |
Unspecified |
| scaffold11623 |
70705 |
70794 |
- |
PL393 |
Unspecified |
| scaffold11623 |
70871 |
71010 |
- |
RS2456 |
Unspecified |
| scaffold11623 |
71070 |
71390 |
+ |
(TCCGG)n |
Simple_repeat |