scaffold11653 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold11653 |
94 |
757 |
+ |
PL919 |
Unspecified |
scaffold11653 |
773 |
836 |
+ |
(GTTTAT)n |
Simple_repeat |
scaffold11653 |
1053 |
1113 |
+ |
(GTTGTG)n |
Simple_repeat |
scaffold11653 |
1085 |
1162 |
+ |
(GTA)n |
Simple_repeat |
scaffold11653 |
7136 |
7269 |
- |
RS11230 |
Unspecified |
scaffold11653 |
7386 |
7413 |
+ |
(T)n |
Simple_repeat |
scaffold11653 |
7992 |
8024 |
+ |
(TAA)n |
Simple_repeat |
scaffold11653 |
8096 |
8433 |
- |
Copia25-PTR_I-int |
LTR/Copia |
scaffold11653 |
8472 |
8917 |
- |
PIGY-I_PS |
LTR/Gypsy |
scaffold11653 |
9224 |
9262 |
- |
Copia5-VV_I-int |
LTR/Copia |
scaffold11653 |
9421 |
9695 |
+ |
RS247 |
Unspecified |
scaffold11653 |
9826 |
9859 |
+ |
A-rich |
Low_complexity |
scaffold11653 |
10323 |
10414 |
- |
ATLANTYS-LTR_OS |
LTR/Gypsy |
scaffold11653 |
13084 |
13148 |
+ |
Gypsy-21_ST-I |
LTR/Gypsy |
scaffold11653 |
14043 |
14144 |
+ |
Ogre-PT1_I-int |
LTR/Gypsy |
scaffold11653 |
14923 |
15032 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
scaffold11653 |
15459 |
15717 |
+ |
RS192 |
Unspecified |
scaffold11653 |
15679 |
16077 |
- |
RS911 |
Unspecified |
scaffold11653 |
15735 |
16154 |
- |
RS149 |
Unspecified |
scaffold11653 |
15797 |
17042 |
- |
RS149 |
Unspecified |
scaffold11653 |
16435 |
17330 |
- |
RS709 |
Unspecified |
scaffold11653 |
17329 |
17767 |
- |
RS709 |
Unspecified |
scaffold11653 |
17767 |
18053 |
+ |
RS3035 |
Unspecified |
scaffold11653 |
18062 |
18326 |
+ |
RS4353 |
Unspecified |
scaffold11653 |
18269 |
18579 |
- |
RS709 |
Unspecified |
scaffold11653 |
19472 |
20734 |
+ |
RS5686 |
Unspecified |
scaffold11653 |
21241 |
21342 |
+ |
(AAC)n |
Simple_repeat |
scaffold11653 |
21407 |
21756 |
+ |
RS1740 |
Unspecified |
scaffold11653 |
22796 |
22886 |
+ |
RS2911 |
Unspecified |
scaffold11653 |
22842 |
23543 |
+ |
RS2911 |
Unspecified |
scaffold11653 |
23763 |
23827 |
+ |
A-rich |
Low_complexity |
scaffold11653 |
24155 |
25121 |
+ |
PL120 |
Unspecified |
scaffold11653 |
25640 |
25736 |
+ |
(GAGTGA)n |
Simple_repeat |
scaffold11653 |
26150 |
26231 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold11653 |
26297 |
28999 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold11653 |
29077 |
29128 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold11653 |
29389 |
29987 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold11653 |
30225 |
30457 |
+ |
RS6214 |
Unspecified |
scaffold11653 |
31053 |
31247 |
- |
MEGY-I_MT |
LTR/Gypsy |
scaffold11653 |
31928 |
31982 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
scaffold11653 |
33139 |
33260 |
- |
RS383 |
Unspecified |
scaffold11653 |
33300 |
33362 |
+ |
(T)n |
Simple_repeat |
scaffold11653 |
33567 |
33685 |
+ |
hAT-14N2_ZM |
DNA/hAT-Tip100 |
scaffold11653 |
34274 |
34297 |
+ |
(A)n |
Simple_repeat |
scaffold11653 |
35179 |
35262 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold11653 |
35591 |
35675 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold11653 |
36037 |
36120 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold11653 |
36185 |
36204 |
+ |
(ATAC)n |
Simple_repeat |
scaffold11653 |
37393 |
37437 |
+ |
A-rich |
Low_complexity |
scaffold11653 |
37467 |
37731 |
- |
RS356 |
Unspecified |
scaffold11653 |
38014 |
38118 |
+ |
RS18316 |
Unspecified |
scaffold11653 |
38027 |
38123 |
- |
RS4475 |
Unspecified |
scaffold11653 |
38364 |
38534 |
+ |
(TAT)n |
Simple_repeat |
scaffold11653 |
38364 |
38430 |
+ |
(TAT)n |
Simple_repeat |
scaffold11653 |
38422 |
38534 |
- |
RS13929 |
Unspecified |
scaffold11653 |
38439 |
38532 |
+ |
RS16382 |
Unspecified |
scaffold11653 |
38938 |
38983 |
+ |
RS18371 |
Unspecified |
scaffold11653 |
39208 |
39237 |
+ |
(GTGAAAA)n |
Simple_repeat |
scaffold11653 |
39256 |
39288 |
+ |
(ACAACT)n |
Simple_repeat |
scaffold11653 |
39508 |
39752 |
- |
RS4 |
Unspecified |
scaffold11653 |
39951 |
40000 |
+ |
(TCTCAT)n |
Simple_repeat |
scaffold11653 |
49340 |
49382 |
+ |
(A)n |
Simple_repeat |
scaffold11653 |
52519 |
52568 |
+ |
(AAC)n |
Simple_repeat |
scaffold11653 |
53173 |
53245 |
+ |
(AATAT)n |
Simple_repeat |
scaffold11653 |
53373 |
53401 |
+ |
(TGAT)n |
Simple_repeat |
scaffold11653 |
55228 |
55327 |
- |
RS8762 |
Unspecified |
scaffold11653 |
58809 |
58844 |
+ |
(GTTTTG)n |
Simple_repeat |
scaffold11653 |
61071 |
61129 |
+ |
(AATAA)n |
Simple_repeat |
scaffold11653 |
62414 |
62442 |
+ |
(ACA)n |
Simple_repeat |
scaffold11653 |
62577 |
62711 |
+ |
RS4639 |
Unspecified |
scaffold11653 |
62895 |
62940 |
+ |
RS8606 |
Unspecified |
scaffold11653 |
62941 |
62998 |
+ |
(AATT)n |
Simple_repeat |
scaffold11653 |
63038 |
63066 |
+ |
(A)n |
Simple_repeat |
scaffold11653 |
64296 |
64329 |
+ |
(TGA)n |
Simple_repeat |
scaffold11653 |
64470 |
65027 |
+ |
PL503 |
Unspecified |
scaffold11653 |
65090 |
65118 |
+ |
(AT)n |
Simple_repeat |
scaffold11653 |
65119 |
65130 |
+ |
A-rich |
Low_complexity |
scaffold11653 |
65132 |
65177 |
+ |
RS8 |
Unspecified |
scaffold11653 |
65182 |
65206 |
+ |
(AT)n |
Simple_repeat |
scaffold11653 |
65805 |
65858 |
+ |
(T)n |
Simple_repeat |
scaffold11653 |
67281 |
67309 |
+ |
A-rich |
Low_complexity |
scaffold11653 |
67369 |
67412 |
+ |
A-rich |
Low_complexity |
scaffold11653 |
67622 |
67640 |
+ |
(A)n |
Simple_repeat |
scaffold11653 |
68117 |
68150 |
+ |
(AT)n |
Simple_repeat |
scaffold11653 |
68359 |
68377 |
+ |
(A)n |
Simple_repeat |
scaffold11653 |
68850 |
68967 |
+ |
RS1474 |
Unspecified |
scaffold11653 |
69114 |
69187 |
+ |
RS1474 |
Unspecified |
scaffold11653 |
69184 |
69283 |
- |
RS2532 |
Unspecified |
scaffold11653 |
69302 |
69500 |
- |
RS2532 |
Unspecified |
scaffold11653 |
69497 |
69548 |
- |
RS5839 |
Unspecified |
scaffold11653 |
69545 |
69610 |
- |
RS2532 |
Unspecified |
scaffold11653 |
69609 |
69942 |
+ |
RS6860 |
Unspecified |
scaffold11653 |
69933 |
70025 |
+ |
RS13375 |
Unspecified |
scaffold11653 |
70917 |
71183 |
- |
RS6860 |
Unspecified |
scaffold11653 |
71003 |
71381 |
- |
RS7708 |
Unspecified |
scaffold11653 |
71464 |
71713 |
- |
RS13195 |
Unspecified |
scaffold11653 |
71908 |
71997 |
- |
RS10869 |
Unspecified |
scaffold11653 |
71925 |
72043 |
- |
RS10869 |
Unspecified |
scaffold11653 |
73419 |
73468 |
+ |
(AATTCT)n |
Simple_repeat |
scaffold11653 |
73462 |
73498 |
+ |
A-rich |
Low_complexity |
scaffold11653 |
73462 |
73605 |
+ |
A-rich |
Low_complexity |
scaffold11653 |
73480 |
73605 |
+ |
RS1399 |
Unspecified |
scaffold11653 |
73543 |
73627 |
- |
RS1691 |
Unspecified |
scaffold11653 |
73919 |
73957 |
+ |
(TT)n |
Simple_repeat |
scaffold11653 |
74754 |
74848 |
- |
Gypsy-3_PD-I |
LTR/Gypsy |