scaffold12109 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12109 |
5517 |
6171 |
- |
RS2084 |
Unspecified |
| scaffold12109 |
8425 |
8707 |
+ |
RS1200 |
Unspecified |
| scaffold12109 |
9244 |
9328 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold12109 |
11187 |
11466 |
+ |
RS168 |
Unspecified |
| scaffold12109 |
13674 |
13865 |
- |
RS110 |
Unspecified |
| scaffold12109 |
13922 |
14193 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold12109 |
14193 |
15147 |
- |
RS801 |
Unspecified |
| scaffold12109 |
14867 |
15390 |
- |
PL770 |
Unspecified |
| scaffold12109 |
15374 |
16100 |
+ |
RS2700 |
Unspecified |
| scaffold12109 |
20058 |
20350 |
- |
RS446 |
Unspecified |
| scaffold12109 |
20214 |
20303 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold12109 |
20581 |
20617 |
+ |
(TTTGTA)n |
Simple_repeat |
| scaffold12109 |
21093 |
21122 |
+ |
A-rich |
Low_complexity |
| scaffold12109 |
21450 |
21754 |
+ |
RS2518 |
Unspecified |
| scaffold12109 |
21654 |
21984 |
+ |
RS7643 |
Unspecified |
| scaffold12109 |
22561 |
22691 |
+ |
L1-4_VC |
LINE/L1 |
| scaffold12109 |
22698 |
22729 |
+ |
(ACA)n |
Simple_repeat |
| scaffold12109 |
26671 |
26707 |
+ |
GA-rich |
Low_complexity |
| scaffold12109 |
28239 |
28361 |
+ |
RS6730 |
Unspecified |
| scaffold12109 |
31554 |
31727 |
+ |
RS2414 |
Unspecified |
| scaffold12109 |
31909 |
31971 |
+ |
(TA)n |
Simple_repeat |
| scaffold12109 |
32247 |
32947 |
- |
RS1129 |
Unspecified |
| scaffold12109 |
32987 |
33208 |
+ |
RS10116 |
Unspecified |
| scaffold12109 |
33230 |
33429 |
+ |
RS1129 |
Unspecified |
| scaffold12109 |
33439 |
33512 |
+ |
RS3574 |
Unspecified |
| scaffold12109 |
33602 |
33667 |
+ |
RS3574 |
Unspecified |
| scaffold12109 |
33682 |
33710 |
+ |
(A)n |
Simple_repeat |
| scaffold12109 |
33946 |
33984 |
+ |
(T)n |
Simple_repeat |
| scaffold12109 |
34249 |
34289 |
+ |
A-rich |
Low_complexity |
| scaffold12109 |
34338 |
34603 |
+ |
RS17600 |
Unspecified |
| scaffold12109 |
36875 |
37305 |
- |
RS11526 |
Unspecified |
| scaffold12109 |
37330 |
37490 |
- |
RS7905 |
Unspecified |
| scaffold12109 |
38561 |
38645 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold12109 |
38667 |
39161 |
+ |
RS239 |
Unspecified |
| scaffold12109 |
39790 |
39835 |
- |
RS978 |
Unspecified |
| scaffold12109 |
40272 |
40307 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold12109 |
40353 |
40440 |
- |
RS978 |
Unspecified |
| scaffold12109 |
41189 |
41239 |
+ |
(ATAACA)n |
Simple_repeat |
| scaffold12109 |
41321 |
41338 |
+ |
(A)n |
Simple_repeat |
| scaffold12109 |
44459 |
44478 |
+ |
(TTG)n |
Simple_repeat |
| scaffold12109 |
44672 |
44714 |
+ |
A-rich |
Low_complexity |
| scaffold12109 |
45294 |
45341 |
+ |
(AGCTGAA)n |
Simple_repeat |
| scaffold12109 |
45452 |
45602 |
+ |
PL565 |
Unspecified |
| scaffold12109 |
45469 |
45602 |
+ |
RS14079 |
Unspecified |
| scaffold12109 |
45606 |
45718 |
+ |
(TATATC)n |
Simple_repeat |
| scaffold12109 |
45709 |
45897 |
+ |
RS943 |
Unspecified |
| scaffold12109 |
45895 |
46000 |
+ |
RS943 |
Unspecified |
| scaffold12109 |
46024 |
46534 |
+ |
RS1793 |
Unspecified |
| scaffold12109 |
46542 |
46721 |
- |
PL438 |
Unspecified |
| scaffold12109 |
46748 |
46967 |
- |
RS7330 |
Unspecified |
| scaffold12109 |
46786 |
47262 |
+ |
RS2601 |
Unspecified |
| scaffold12109 |
47186 |
47454 |
+ |
RS2003 |
Unspecified |
| scaffold12109 |
47485 |
47887 |
+ |
RS184 |
Unspecified |
| scaffold12109 |
49325 |
49755 |
- |
RS11526 |
Unspecified |
| scaffold12109 |
49760 |
49806 |
+ |
(TAATGAA)n |
Simple_repeat |
| scaffold12109 |
50306 |
50350 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold12109 |
50893 |
51289 |
- |
RS512 |
Unspecified |
| scaffold12109 |
51381 |
51619 |
+ |
RS1221 |
Unspecified |
| scaffold12109 |
53866 |
54037 |
- |
RS17860 |
Unspecified |
| scaffold12109 |
54020 |
54068 |
- |
RS18371 |
Unspecified |
| scaffold12109 |
54427 |
54472 |
- |
RS978 |
Unspecified |
| scaffold12109 |
54909 |
54944 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold12109 |
54990 |
55073 |
- |
RS978 |
Unspecified |
| scaffold12109 |
55822 |
55872 |
+ |
(ATAACA)n |
Simple_repeat |
| scaffold12109 |
55954 |
55972 |
+ |
(A)n |
Simple_repeat |
| scaffold12109 |
59078 |
59097 |
+ |
(TTG)n |
Simple_repeat |
| scaffold12109 |
59275 |
59331 |
+ |
(AAAC)n |
Simple_repeat |
| scaffold12109 |
59873 |
60078 |
+ |
PL565 |
Unspecified |
| scaffold12109 |
60057 |
60207 |
+ |
PL565 |
Unspecified |
| scaffold12109 |
60074 |
60207 |
+ |
RS14079 |
Unspecified |
| scaffold12109 |
60211 |
60323 |
+ |
(TATATC)n |
Simple_repeat |
| scaffold12109 |
60314 |
60502 |
+ |
RS943 |
Unspecified |
| scaffold12109 |
60500 |
60605 |
+ |
RS943 |
Unspecified |
| scaffold12109 |
60629 |
60769 |
- |
PL438 |
Unspecified |
| scaffold12109 |
62999 |
63430 |
- |
RS11526 |
Unspecified |
| scaffold12109 |
63435 |
63481 |
+ |
(TAATGAA)n |
Simple_repeat |
| scaffold12109 |
67329 |
67369 |
+ |
(CTTTCT)n |
Simple_repeat |
| scaffold12109 |
67523 |
67624 |
+ |
RS14383 |
Unspecified |
| scaffold12109 |
67940 |
67980 |
+ |
(CTTTCT)n |
Simple_repeat |
| scaffold12109 |
68076 |
68095 |
+ |
(TCA)n |
Simple_repeat |
| scaffold12109 |
68140 |
68241 |
+ |
RS14383 |
Unspecified |
| scaffold12109 |
69133 |
69188 |
+ |
RS14426 |
Unspecified |
| scaffold12109 |
69445 |
69465 |
+ |
(T)n |
Simple_repeat |
| scaffold12109 |
69622 |
69673 |
+ |
(AATTTTT)n |
Simple_repeat |
| scaffold12109 |
69727 |
69980 |
+ |
RS356 |
Unspecified |
| scaffold12109 |
70785 |
70822 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold12109 |
71129 |
71166 |
+ |
(TTTTA)n |
Simple_repeat |