scaffold125 Repeat List
genome start end strand repeat-name repeat-class
scaffold125 1 384 + (TA)n Simple_repeat
scaffold125 351 384 + (TA)n Simple_repeat
scaffold125 979 1952 - PL324 Unspecified
scaffold125 1984 2012 + (T)n Simple_repeat
scaffold125 2289 2320 + (TTATT)n Simple_repeat
scaffold125 3412 4032 - RS405 Unspecified
scaffold125 4530 4686 - RS3061 Unspecified
scaffold125 4677 4830 + PL412 Unspecified
scaffold125 4702 4932 + (TA)n Simple_repeat
scaffold125 4895 4932 + (TA)n Simple_repeat
scaffold125 5443 5484 + (TTTTA)n Simple_repeat
scaffold125 5820 6359 + RS215 Unspecified
scaffold125 6350 6724 + RS8 Unspecified
scaffold125 6872 6907 + (AT)n Simple_repeat
scaffold125 7290 7332 + (TTTTTCA)n Simple_repeat
scaffold125 7921 7963 + (TTTAT)n Simple_repeat
scaffold125 12479 12514 + (AATAAC)n Simple_repeat
scaffold125 13035 13320 + RS2168 Unspecified
scaffold125 13394 13418 + (ATATT)n Simple_repeat
scaffold125 13431 13929 + RS215 Unspecified
scaffold125 15599 16376 + RS220 Unspecified
scaffold125 16365 16733 + RS8 Unspecified
scaffold125 16431 16774 - RS311 Unspecified
scaffold125 16730 16820 - RS1061 Unspecified
scaffold125 22485 22541 + (TATT)n Simple_repeat
scaffold125 23623 23647 + (TTAG)n Simple_repeat
scaffold125 24304 24360 + (CTACTC)n Simple_repeat
scaffold125 25105 28298 + Copia-13_SB-I LTR/Copia
scaffold125 29099 29578 + PL459 Unspecified
scaffold125 29578 29851 - RS586 Unspecified
scaffold125 30401 30454 + (TAATT)n Simple_repeat
scaffold125 30709 30803 + RS16382 Unspecified
scaffold125 30900 31190 + (CTGAA)n Simple_repeat
scaffold125 32773 32949 - RS544 Unspecified
scaffold125 32814 32979 + RS1102 Unspecified
scaffold125 35454 37078 - RIRE1_I-int LTR/Copia
scaffold125 38294 38354 + A-rich Low_complexity
scaffold125 39060 39107 + (TTAA)n Simple_repeat
scaffold125 39446 40293 + RS228 Unspecified
scaffold125 39685 40294 - PL459 Unspecified
scaffold125 40364 40408 + (TAA)n Simple_repeat
scaffold125 40517 40869 + RS42 Unspecified
scaffold125 40972 41008 + PL850 Unspecified
scaffold125 41661 41700 + A-rich Low_complexity
scaffold125 41842 42397 + RS5416 Unspecified
scaffold125 42464 42628 + RS15774 Unspecified
scaffold125 42832 42881 + (ATAAGAT)n Simple_repeat
scaffold125 43286 43313 + (T)n Simple_repeat
scaffold125 44583 44740 + RS233 Unspecified
scaffold125 46665 46705 + (T)n Simple_repeat
scaffold125 48014 48038 + (T)n Simple_repeat
scaffold125 50553 50643 - RS7417 Unspecified
scaffold125 50940 52225 - Atlantys1_I-int LTR/Gypsy
scaffold125 52385 54161 - Atlantys1_I-int LTR/Gypsy
scaffold125 54426 54527 - Atlantys1_I-int LTR/Gypsy
scaffold125 54685 54776 - Gypsy-38_Mad-I LTR/Gypsy
scaffold125 57673 57849 + RS503 Unspecified
scaffold125 57987 58012 + (TAA)n Simple_repeat
scaffold125 58745 58838 + (T)n Simple_repeat
scaffold125 58885 59063 - RS1098 Unspecified
scaffold125 59991 60185 + RS522 Unspecified
scaffold125 60071 60234 + RS6556 Unspecified
scaffold125 60413 60542 + RS2021 Unspecified
scaffold125 60680 60907 - RS158 Unspecified
scaffold125 61007 61038 + (CTT)n Simple_repeat
scaffold125 61115 62841 + Copia-86_GM-I LTR/Copia
scaffold125 61863 62841 + Copia-86_GM-I LTR/Copia
scaffold125 63045 64584 + Copia-86_GM-I LTR/Copia
scaffold125 64758 64920 + Copia-86_GM-I LTR/Copia
scaffold125 65407 65438 + (CTT)n Simple_repeat
scaffold125 65695 65739 + (TCCACA)n Simple_repeat
scaffold125 65756 65800 + (ATTTTAT)n Simple_repeat
scaffold125 66170 67212 - RS211 Unspecified
scaffold125 67676 67711 + (A)n Simple_repeat
scaffold125 68775 69154 + PL744 Unspecified
scaffold125 69296 69680 - PL744 Unspecified
scaffold125 69606 69696 + PL523 Unspecified
scaffold125 70272 70549 + PL408 Unspecified
scaffold125 72594 73378 + SHALINE10_MT LINE/L1
scaffold125 75455 75483 + (A)n Simple_repeat
scaffold125 76339 76383 + A-rich Low_complexity
scaffold125 76537 76635 - RS4475 Unspecified
scaffold125 76703 76965 + RS26 Unspecified
scaffold125 77080 77268 - RS1127 Unspecified
scaffold125 77271 77322 + (ATATTA)n Simple_repeat
scaffold125 77615 77690 + (T)n Simple_repeat
scaffold125 77787 77795 + (AATTGTT)n Simple_repeat
scaffold125 77796 77822 + (T)n Simple_repeat
scaffold125 77823 77845 + (AATTGTT)n Simple_repeat
scaffold125 78080 78207 + RS5924 Unspecified
scaffold125 78582 78709 - RS5924 Unspecified
scaffold125 81291 81330 + (TTA)n Simple_repeat
scaffold125 81520 81546 + (TC)n Simple_repeat
scaffold125 81638 81722 + (TTTTAA)n Simple_repeat
scaffold125 83084 83110 + (TAA)n Simple_repeat
scaffold125 83223 83272 + (AAC)n Simple_repeat
scaffold125 83380 83484 + (A)n Simple_repeat
scaffold125 83533 83912 + RS1442 Unspecified
scaffold125 84277 84331 + A-rich Low_complexity
scaffold125 84726 84793 + RS18413 Unspecified
scaffold125 84820 84864 + (CCGGC)n Simple_repeat
scaffold125 84954 85035 + (ACCCGG)n Simple_repeat
scaffold125 85101 85126 + (T)n Simple_repeat
scaffold125 85207 85237 + (TTATA)n Simple_repeat
scaffold125 85272 85362 + (AATTTTA)n Simple_repeat
scaffold125 86217 86401 + (CCCGA)n Simple_repeat
scaffold125 86548 86725 + (CCCGA)n Simple_repeat
scaffold125 90202 90223 + (T)n Simple_repeat
scaffold125 91456 91488 + A-rich Low_complexity
scaffold125 93196 93226 + (TCA)n Simple_repeat
scaffold125 94092 94129 + A-rich Low_complexity
scaffold125 94131 94152 + (T)n Simple_repeat
scaffold125 94173 94224 + (ATGAATA)n Simple_repeat
scaffold125 94301 94336 + (TTAA)n Simple_repeat
scaffold125 94504 94551 + (AATA)n Simple_repeat
scaffold125 95117 95156 + (T)n Simple_repeat
scaffold125 96164 96214 + A-rich Low_complexity
scaffold125 97052 97149 + RS4106 Unspecified
scaffold125 97299 97372 + (GCA)n Simple_repeat
scaffold125 98070 98118 + A-rich Low_complexity
scaffold125 98644 98687 + (CCTAGG)n Simple_repeat
scaffold125 98757 98820 + (ACGAA)n Simple_repeat
scaffold125 99110 99136 + (AT)n Simple_repeat
scaffold125 102398 102672 - RS1936 Unspecified
scaffold125 102656 102699 - RS1936 Unspecified
scaffold125 102720 102752 + (TTGTTT)n Simple_repeat
scaffold125 103649 103786 + (CGTTCA)n Simple_repeat
scaffold125 103752 103786 + (CGTTCA)n Simple_repeat
scaffold125 103920 104133 - RS3885 Unspecified
scaffold125 104058 104317 - RS1828 Unspecified
scaffold125 104230 104493 + RS5424 Unspecified
scaffold125 104506 104667 + (TAA)n Simple_repeat
scaffold125 104644 104667 + (TAA)n Simple_repeat
scaffold125 104962 105138 + RS4662 Unspecified
scaffold125 105240 105285 - RS1374 Unspecified
scaffold125 105324 105503 - RS1374 Unspecified
scaffold125 105632 105741 + A-rich Low_complexity
scaffold125 106339 106524 + RS582 Unspecified
scaffold125 107048 107203 + PL504 Unspecified
scaffold125 107196 107473 - PL194 Unspecified
scaffold125 107754 107808 + (TAAAA)n Simple_repeat
scaffold125 107943 107957 + (TATATT)n Simple_repeat
scaffold125 107958 107993 + (T)n Simple_repeat
scaffold125 107994 108004 + (TATATT)n Simple_repeat
scaffold125 108058 108384 - PL789 Unspecified
scaffold125 109709 109728 + (A)n Simple_repeat
scaffold125 110628 110651 + (AGAA)n Simple_repeat
scaffold125 114970 115011 + (AACTACA)n Simple_repeat
scaffold125 116291 116309 + (T)n Simple_repeat
scaffold125 117234 117595 - PL153 Unspecified
scaffold125 117473 117646 - PL753 Unspecified
scaffold125 117524 117637 + PL153 Unspecified
scaffold125 121234 121357 + RS10965 Unspecified
scaffold125 123647 123721 + (A)n Simple_repeat
scaffold125 124906 124939 + A-rich Low_complexity
scaffold125 125511 125531 + (A)n Simple_repeat
scaffold125 125811 126257 - PL2 Unspecified
scaffold125 126931 126990 + GA-rich Low_complexity
scaffold125 127104 127990 + RS12374 Unspecified
scaffold125 127798 128104 + RS13222 Unspecified
scaffold125 128364 128577 + RS10775 Unspecified
scaffold125 128574 129183 + RS9196 Unspecified
scaffold125 129221 129427 + RS8170 Unspecified
scaffold125 129295 129645 + A-rich Low_complexity
scaffold125 129584 129645 + A-rich Low_complexity
scaffold125 130917 130942 + (TTC)n Simple_repeat
scaffold125 130988 131405 + RS9133 Unspecified
scaffold125 131625 132001 + RS4376 Unspecified
scaffold125 132166 132484 + RS9579 Unspecified
scaffold125 132355 132513 + RS11924 Unspecified
scaffold125 132552 132614 + A-rich Low_complexity
scaffold125 132647 132686 + (CAATAA)n Simple_repeat
scaffold125 133086 133346 + RS7847 Unspecified
scaffold125 133632 133697 + A-rich Low_complexity
scaffold125 134485 134509 + (TTA)n Simple_repeat
scaffold125 134534 134570 + A-rich Low_complexity
scaffold125 135104 135139 + (ACTTTAA)n Simple_repeat
scaffold125 135367 135389 + (AAAT)n Simple_repeat
scaffold125 135405 135443 + A-rich Low_complexity
scaffold125 137318 137364 + (AC)n Simple_repeat
scaffold125 138741 139001 - RS365 Unspecified
scaffold125 140181 140457 + RS11043 Unspecified
scaffold125 140502 140568 + (TAATATA)n Simple_repeat
scaffold125 141285 141310 + (A)n Simple_repeat
scaffold125 142985 143011 + A-rich Low_complexity
scaffold125 143118 143135 + (CTCTCTT)n Simple_repeat
scaffold125 143136 143191 + (CT)n Simple_repeat
scaffold125 143409 143440 + (TTTTG)n Simple_repeat
scaffold125 143487 143552 + (TTTTCAT)n Simple_repeat
scaffold125 143654 143691 + (T)n Simple_repeat
scaffold125 143906 143943 + (T)n Simple_repeat
scaffold125 147174 147213 + (T)n Simple_repeat
scaffold125 147620 147651 + (T)n Simple_repeat
scaffold125 147806 147864 + (TTGATTG)n Simple_repeat
scaffold125 148035 148140 + RS12890 Unspecified
scaffold125 148353 148390 + (ATTATAA)n Simple_repeat
scaffold125 148552 148615 + (TTTA)n Simple_repeat
scaffold125 150139 150183 + RS12306 Unspecified
scaffold125 150472 150571 - ENSUPMET DNA/CMC-EnSpm
scaffold125 151183 151243 + (TTAT)n Simple_repeat
scaffold125 151493 151512 + (A)n Simple_repeat
scaffold125 152354 152394 + GA-rich Low_complexity
scaffold125 153113 153162 + (TATAATT)n Simple_repeat
scaffold125 153922 153969 + A-rich Low_complexity
scaffold125 154255 154281 + (GGA)n Simple_repeat
scaffold125 154279 154350 + (AGAGAT)n Simple_repeat
scaffold125 155215 155326 + RS2892 Unspecified
scaffold125 155554 155582 + (ACC)n Simple_repeat
scaffold125 156175 156233 + RS4867 Unspecified
scaffold125 156303 156409 + RS4550 Unspecified
scaffold125 156339 156470 + RS4867 Unspecified
scaffold125 156701 156867 + RS4771 Unspecified
scaffold125 159281 159370 + RS4550 Unspecified
scaffold125 159300 159431 + RS4867 Unspecified
scaffold125 159662 159831 + RS4771 Unspecified
scaffold125 164025 164059 + (ATTCAT)n Simple_repeat
scaffold125 165640 165659 + (A)n Simple_repeat
scaffold125 167400 167440 + (T)n Simple_repeat
scaffold125 168131 168153 + (A)n Simple_repeat
scaffold125 168655 168687 + (TGCAAT)n Simple_repeat
scaffold125 168854 169107 + RS68 Unspecified
scaffold125 168886 169112 + RS13348 Unspecified
scaffold125 169140 169873 + PL617 Unspecified
scaffold125 171151 171242 + Copia-1_ST-LTR LTR/Copia
scaffold125 171320 171663 + Copia-1_ST-LTR LTR/Copia
scaffold125 171846 171924 + Copia-1_ST-LTR LTR/Copia
scaffold125 172445 172559 + Copia-1_ST-LTR LTR/Copia
scaffold125 173684 173703 + (ATC)n Simple_repeat
scaffold125 173873 173900 + (GAT)n Simple_repeat
scaffold125 173960 174168 - RS18 Unspecified
scaffold125 174215 174541 + RS2543 Unspecified
scaffold125 174697 174738 + A-rich Low_complexity
scaffold125 174882 174942 + (ATTTAAG)n Simple_repeat
scaffold125 174958 175075 + RS13542 Unspecified
scaffold125 175061 175268 + RS6506 Unspecified
scaffold125 175519 175590 + A-rich Low_complexity
scaffold125 175981 176021 + (AATTTG)n Simple_repeat
scaffold125 176022 176033 + A-rich Low_complexity
scaffold125 176451 176529 + hAT-9_SBi DNA/hAT-Tag1
scaffold125 176692 176720 + (AAAAT)n Simple_repeat
scaffold125 176877 176913 + (TTTTA)n Simple_repeat
scaffold125 177340 177381 + (CGTCAA)n Simple_repeat
scaffold125 179642 179685 + (AGATT)n Simple_repeat
scaffold125 183383 183409 + (T)n Simple_repeat
scaffold125 183542 183576 + A-rich Low_complexity
scaffold125 183681 183707 + (ATTT)n Simple_repeat
scaffold125 184240 184569 + RS42 Unspecified
scaffold125 184640 184863 - RS11189 Unspecified
scaffold125 184839 184873 - RS586 Unspecified
scaffold125 185135 185158 + (T)n Simple_repeat
scaffold125 188391 188463 + A-rich Low_complexity
scaffold125 189364 189387 + (AAAT)n Simple_repeat
scaffold125 190121 190138 + (T)n Simple_repeat
scaffold125 190156 190276 + RS15470 Unspecified
scaffold125 190606 190731 + (T)n Simple_repeat
scaffold125 190606 190640 + (T)n Simple_repeat
scaffold125 190627 190731 - RS972 Unspecified
scaffold125 191370 191449 + (TGATT)n Simple_repeat
scaffold125 193670 193826 + (CCCGA)n Simple_repeat
scaffold125 194054 194157 - RS16382 Unspecified
scaffold125 194063 194176 + RS6320 Unspecified
scaffold125 194166 194238 + RS4 Unspecified
scaffold125 194191 194235 + RS18405 Unspecified
scaffold125 194237 194500 + RS356 Unspecified
scaffold125 194879 194918 + (TTAA)n Simple_repeat
scaffold125 195261 195290 + (A)n Simple_repeat
scaffold125 195625 195649 + (TATT)n Simple_repeat
scaffold125 195848 195887 + (AATTG)n Simple_repeat
scaffold125 198222 198378 + (CCCGA)n Simple_repeat
scaffold125 201761 201816 + (AATA)n Simple_repeat
scaffold125 201861 201887 + (TCGAA)n Simple_repeat
scaffold125 202075 202113 + A-rich Low_complexity
scaffold125 202224 202264 + (TTCAAT)n Simple_repeat
scaffold125 202468 202546 + (AATTC)n Simple_repeat
scaffold125 202567 202767 - RS7578 Unspecified
scaffold125 202871 202954 + (AATTGATT)n Simple_repeat
scaffold125 202987 203092 + PL523 Unspecified
scaffold125 203216 203288 + (TT)n Simple_repeat
scaffold125 203496 203625 - RS43 Unspecified
scaffold125 203890 204254 + RS8 Unspecified
scaffold125 204437 204472 + (T)n Simple_repeat
scaffold125 204639 204676 + (CTCTCTA)n Simple_repeat
scaffold125 205463 205508 + (AATTAA)n Simple_repeat
scaffold125 206309 206337 + (ATTA)n Simple_repeat
scaffold125 206400 206443 + A-rich Low_complexity
scaffold125 206667 206685 + (T)n Simple_repeat
scaffold125 206686 206706 + (TTATTT)n Simple_repeat
scaffold125 209020 209073 + (ATTTATT)n Simple_repeat
scaffold125 210415 210545 - RS4867 Unspecified
scaffold125 210476 210581 - RS4550 Unspecified
scaffold125 210600 210760 - RS5236 Unspecified
scaffold125 211857 212023 - RS4771 Unspecified
scaffold125 212206 212336 - RS4867 Unspecified
scaffold125 212267 212372 - RS4550 Unspecified
scaffold125 212391 212548 - RS5236 Unspecified
scaffold125 213582 213621 + (T)n Simple_repeat
scaffold125 214545 214593 + A-rich Low_complexity
scaffold125 216622 216813 - RS11407 Unspecified
scaffold125 220504 220613 - RS9121 Unspecified
scaffold125 228500 228748 + RS240 Unspecified
scaffold125 230211 230503 + PL48 Unspecified
scaffold125 231144 231251 + LINE1I_MT LINE/L1
scaffold125 231281 231562 + LINE LINE(TransposonPSI)
scaffold125 231288 231486 + LINE1-26_SBi LINE/L1
scaffold125 231919 232041 - RS919 Unspecified
scaffold125 233784 234167 + PL111 Unspecified
scaffold125 234207 234592 - RS1221 Unspecified
scaffold125 235104 235160 + (A)n Simple_repeat
scaffold125 235197 235226 + (TAAAA)n Simple_repeat
scaffold125 235652 235755 - RS291 Unspecified
scaffold125 235753 235879 + (T)n Simple_repeat
scaffold125 237259 237293 + (TA)n Simple_repeat
scaffold125 237344 237424 + (AACTG)n Simple_repeat
scaffold125 237449 237516 + (AACTG)n Simple_repeat
scaffold125 237673 237705 + RS16598 Unspecified
scaffold125 237706 237827 + PL393 Unspecified
scaffold125 237738 237868 + RS17877 Unspecified
scaffold125 237901 237943 + RS17877 Unspecified
scaffold125 237959 237999 - RS17877 Unspecified
scaffold125 238293 238336 + (TTTGATAA)n Simple_repeat
scaffold125 240517 240620 - RS2719 Unspecified
scaffold125 240616 240749 - RS499 Unspecified
scaffold125 240780 241021 + PL347 Unspecified
scaffold125 241020 241231 + RS6744 Unspecified
scaffold125 241365 241474 - PL8 Unspecified
scaffold125 241575 241622 + (CTCGGA)n Simple_repeat
scaffold125 241806 241839 + (CT)n Simple_repeat
scaffold125 241914 241972 + (CCG)n Simple_repeat
scaffold125 242315 242369 + (ATTGGTT)n Simple_repeat
scaffold125 242685 242954 - RS6187 Unspecified
scaffold125 243104 243526 + RS2626 Unspecified
scaffold125 243689 243743 - RS2542 Unspecified
scaffold125 245052 245117 + GA-rich Low_complexity
scaffold125 245270 245370 + RS4475 Unspecified
scaffold125 245920 245990 + (TTA)n Simple_repeat
scaffold125 246075 246143 + (TATTAG)n Simple_repeat
scaffold125 246252 246352 + RS16382 Unspecified
scaffold125 246451 246689 + RS10268 Unspecified
scaffold125 284879 284921 + (CTTTCTT)n Simple_repeat