scaffold12967 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12967 |
2 |
57 |
+ |
(ATTTATG)n |
Simple_repeat |
| scaffold12967 |
256 |
453 |
+ |
PL292 |
Unspecified |
| scaffold12967 |
901 |
1002 |
+ |
RS950 |
Unspecified |
| scaffold12967 |
1195 |
1635 |
- |
RS472 |
Unspecified |
| scaffold12967 |
2908 |
3198 |
+ |
RS201 |
Unspecified |
| scaffold12967 |
3199 |
3853 |
+ |
RS378 |
Unspecified |
| scaffold12967 |
3940 |
3973 |
+ |
(T)n |
Simple_repeat |
| scaffold12967 |
4222 |
4653 |
+ |
PL580 |
Unspecified |
| scaffold12967 |
4683 |
4714 |
+ |
(T)n |
Simple_repeat |
| scaffold12967 |
4746 |
4807 |
+ |
(AATT)n |
Simple_repeat |
| scaffold12967 |
4893 |
4933 |
+ |
GA-rich |
Low_complexity |
| scaffold12967 |
5402 |
5425 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold12967 |
5600 |
5783 |
+ |
RS3756 |
Unspecified |
| scaffold12967 |
6143 |
6277 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold12967 |
6851 |
6902 |
+ |
(ATTTC)n |
Simple_repeat |
| scaffold12967 |
7515 |
7536 |
+ |
(AT)n |
Simple_repeat |
| scaffold12967 |
8414 |
9349 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold12967 |
10530 |
10558 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12967 |
10559 |
10590 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold12967 |
10591 |
10982 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12967 |
11305 |
11408 |
+ |
RS750 |
Unspecified |
| scaffold12967 |
12315 |
12766 |
- |
PL2 |
Unspecified |
| scaffold12967 |
13929 |
13966 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold12967 |
14069 |
14104 |
+ |
(TTAATAA)n |
Simple_repeat |
| scaffold12967 |
14293 |
14342 |
+ |
(AAT)n |
Simple_repeat |
| scaffold12967 |
14710 |
14799 |
+ |
(ATTTAT)n |
Simple_repeat |
| scaffold12967 |
15018 |
15054 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
15439 |
15469 |
+ |
(AATG)n |
Simple_repeat |
| scaffold12967 |
15569 |
17129 |
- |
Copia-79_ST-I |
LTR/Copia |
| scaffold12967 |
17679 |
18446 |
- |
Copia-79_ST-I |
LTR/Copia |
| scaffold12967 |
18917 |
18950 |
- |
Copia-79_ST-I |
LTR/Copia |
| scaffold12967 |
19295 |
20131 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold12967 |
20684 |
20714 |
+ |
(AATG)n |
Simple_repeat |
| scaffold12967 |
22250 |
22276 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
23314 |
23784 |
- |
PL582 |
Unspecified |
| scaffold12967 |
24147 |
24187 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
25405 |
25496 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
25794 |
25847 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold12967 |
26341 |
26389 |
+ |
(CAACCGA)n |
Simple_repeat |
| scaffold12967 |
26408 |
26450 |
+ |
(CAC)n |
Simple_repeat |
| scaffold12967 |
28091 |
28135 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold12967 |
28688 |
29283 |
- |
RS507 |
Unspecified |
| scaffold12967 |
29356 |
29412 |
+ |
(CACG)n |
Simple_repeat |
| scaffold12967 |
29515 |
29544 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
29826 |
29958 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
30305 |
30500 |
- |
RS2565 |
Unspecified |
| scaffold12967 |
30873 |
30894 |
+ |
(A)n |
Simple_repeat |
| scaffold12967 |
31139 |
31163 |
+ |
(T)n |
Simple_repeat |
| scaffold12967 |
31345 |
31377 |
+ |
(AATT)n |
Simple_repeat |
| scaffold12967 |
31665 |
31826 |
+ |
G-rich |
Low_complexity |
| scaffold12967 |
32018 |
32060 |
+ |
G-rich |
Low_complexity |
| scaffold12967 |
32272 |
32388 |
- |
PL683 |
Unspecified |
| scaffold12967 |
33664 |
33812 |
- |
RS5432 |
Unspecified |
| scaffold12967 |
35015 |
35065 |
+ |
(CCA)n |
Simple_repeat |
| scaffold12967 |
35765 |
35912 |
- |
RS5432 |
Unspecified |
| scaffold12967 |
37002 |
37721 |
+ |
L1-6_Mad |
LINE/L1 |
| scaffold12967 |
38054 |
38083 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
38462 |
38531 |
- |
RS1201 |
Unspecified |
| scaffold12967 |
38580 |
38838 |
+ |
RS5066 |
Unspecified |
| scaffold12967 |
39222 |
39257 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold12967 |
39278 |
39313 |
+ |
(T)n |
Simple_repeat |
| scaffold12967 |
40543 |
40579 |
+ |
(A)n |
Simple_repeat |
| scaffold12967 |
40767 |
40811 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold12967 |
40857 |
40902 |
+ |
(TATTAT)n |
Simple_repeat |
| scaffold12967 |
41622 |
41678 |
+ |
(CAA)n |
Simple_repeat |
| scaffold12967 |
41858 |
41887 |
+ |
(AAC)n |
Simple_repeat |
| scaffold12967 |
42297 |
42346 |
+ |
(TACA)n |
Simple_repeat |
| scaffold12967 |
42563 |
42597 |
+ |
(AAT)n |
Simple_repeat |
| scaffold12967 |
42987 |
43007 |
+ |
(A)n |
Simple_repeat |
| scaffold12967 |
43095 |
43133 |
+ |
(T)n |
Simple_repeat |
| scaffold12967 |
43216 |
43261 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12967 |
43405 |
43422 |
+ |
(CAA)n |
Simple_repeat |
| scaffold12967 |
43713 |
43735 |
+ |
(TATTATA)n |
Simple_repeat |
| scaffold12967 |
43736 |
43765 |
+ |
(TA)n |
Simple_repeat |
| scaffold12967 |
43766 |
43801 |
+ |
(TATTATA)n |
Simple_repeat |
| scaffold12967 |
44004 |
44212 |
+ |
hAT-4_PTr |
DNA/hAT-Tip100 |
| scaffold12967 |
44145 |
44212 |
+ |
hAT-4_PTr |
DNA/hAT-Tip100 |
| scaffold12967 |
44767 |
44800 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold12967 |
45053 |
45076 |
+ |
(AGA)n |
Simple_repeat |
| scaffold12967 |
45209 |
45233 |
+ |
(GAT)n |
Simple_repeat |
| scaffold12967 |
45511 |
45550 |
+ |
(A)n |
Simple_repeat |
| scaffold12967 |
45550 |
45611 |
+ |
(ATC)n |
Simple_repeat |
| scaffold12967 |
45875 |
45946 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold12967 |
46371 |
46769 |
- |
RS1279 |
Unspecified |
| scaffold12967 |
48220 |
48401 |
+ |
RS14329 |
Unspecified |
| scaffold12967 |
48674 |
48761 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold12967 |
49057 |
49097 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
49258 |
49317 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12967 |
49528 |
49949 |
+ |
RS2038 |
Unspecified |
| scaffold12967 |
50087 |
50136 |
+ |
(T)n |
Simple_repeat |
| scaffold12967 |
50453 |
50626 |
+ |
RS1608 |
Unspecified |
| scaffold12967 |
50486 |
50644 |
+ |
RS1908 |
Unspecified |
| scaffold12967 |
50504 |
50662 |
+ |
RS3889 |
Unspecified |
| scaffold12967 |
50672 |
50843 |
- |
RS11524 |
Unspecified |
| scaffold12967 |
50857 |
50978 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold12967 |
52017 |
52051 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
54781 |
54815 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold12967 |
56592 |
56627 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
56723 |
56816 |
+ |
RS16382 |
Unspecified |
| scaffold12967 |
57776 |
57847 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold12967 |
57848 |
58062 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold12967 |
59029 |
59205 |
+ |
RS945 |
Unspecified |
| scaffold12967 |
59354 |
59662 |
+ |
RS945 |
Unspecified |
| scaffold12967 |
59994 |
60074 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
60586 |
60677 |
- |
RS522 |
Unspecified |
| scaffold12967 |
61961 |
61992 |
+ |
(TAA)n |
Simple_repeat |
| scaffold12967 |
62112 |
62138 |
+ |
(ATTTAT)n |
Simple_repeat |
| scaffold12967 |
62531 |
62576 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
63196 |
63221 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold12967 |
63360 |
63488 |
- |
DS-RICE3N |
DNA/hAT-Ac |
| scaffold12967 |
63656 |
63893 |
+ |
RS221 |
Unspecified |
| scaffold12967 |
63898 |
64078 |
+ |
PL567 |
Unspecified |
| scaffold12967 |
64452 |
64576 |
- |
DS-RICE3N |
DNA/hAT-Ac |
| scaffold12967 |
64737 |
65037 |
+ |
RS221 |
Unspecified |
| scaffold12967 |
65955 |
65979 |
+ |
(T)n |
Simple_repeat |
| scaffold12967 |
66299 |
66455 |
+ |
RS18020 |
Unspecified |
| scaffold12967 |
66426 |
66644 |
- |
RS9928 |
Unspecified |
| scaffold12967 |
66910 |
66927 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold12967 |
66928 |
66960 |
+ |
(TATAGT)n |
Simple_repeat |
| scaffold12967 |
67267 |
67335 |
+ |
RS710 |
Unspecified |
| scaffold12967 |
67412 |
67661 |
+ |
RS26 |
Unspecified |
| scaffold12967 |
67773 |
67811 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold12967 |
68783 |
68938 |
- |
RS702 |
Unspecified |
| scaffold12967 |
69236 |
69427 |
- |
RS904 |
Unspecified |
| scaffold12967 |
69302 |
69442 |
+ |
RS2962 |
Unspecified |
| scaffold12967 |
69554 |
69593 |
+ |
(GAATC)n |
Simple_repeat |
| scaffold12967 |
69993 |
70033 |
+ |
COP20_I_MT-int |
LTR/Copia |
| scaffold12967 |
70814 |
71074 |
+ |
RS702 |
Unspecified |
| scaffold12967 |
71072 |
71221 |
+ |
RS2962 |
Unspecified |
| scaffold12967 |
71786 |
71850 |
+ |
A-rich |
Low_complexity |
| scaffold12967 |
71950 |
72001 |
+ |
(ATAAT)n |
Simple_repeat |