scaffold1331 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1331 |
36 |
268 |
+ |
HARB-4_Mad |
DNA/PIF-Harbinger |
| scaffold1331 |
178 |
296 |
+ |
EnSpm-2_TD |
DNA/CMC-EnSpm |
| scaffold1331 |
881 |
966 |
- |
RS17814 |
Unspecified |
| scaffold1331 |
1712 |
1897 |
- |
RS5741 |
Unspecified |
| scaffold1331 |
1948 |
2045 |
+ |
PL684 |
Unspecified |
| scaffold1331 |
2760 |
2857 |
+ |
(CAA)n |
Simple_repeat |
| scaffold1331 |
2877 |
3179 |
- |
RS11425 |
Unspecified |
| scaffold1331 |
3454 |
3510 |
+ |
(TGA)n |
Simple_repeat |
| scaffold1331 |
3511 |
3540 |
+ |
(AGGATG)n |
Simple_repeat |
| scaffold1331 |
3690 |
3740 |
+ |
(TACTTTT)n |
Simple_repeat |
| scaffold1331 |
3788 |
3927 |
- |
RS12663 |
Unspecified |
| scaffold1331 |
3885 |
4257 |
- |
PL672 |
Unspecified |
| scaffold1331 |
4351 |
4997 |
+ |
PL733 |
Unspecified |
| scaffold1331 |
4998 |
5113 |
- |
RS5120 |
Unspecified |
| scaffold1331 |
6158 |
6346 |
+ |
RS15143 |
Unspecified |
| scaffold1331 |
6453 |
6500 |
+ |
(TAAGAA)n |
Simple_repeat |
| scaffold1331 |
6818 |
6925 |
+ |
RS15052 |
Unspecified |
| scaffold1331 |
6968 |
7102 |
+ |
RS15190 |
Unspecified |
| scaffold1331 |
7308 |
7401 |
+ |
PL733 |
Unspecified |
| scaffold1331 |
7400 |
7454 |
+ |
RS260 |
Unspecified |
| scaffold1331 |
7452 |
9505 |
- |
RS307 |
Unspecified |
| scaffold1331 |
10866 |
11039 |
+ |
RS1261 |
Unspecified |
| scaffold1331 |
10911 |
11120 |
+ |
(TATGATA)n |
Simple_repeat |
| scaffold1331 |
11077 |
11120 |
+ |
(TATGATA)n |
Simple_repeat |
| scaffold1331 |
11521 |
11673 |
- |
RS3736 |
Unspecified |
| scaffold1331 |
11720 |
12094 |
- |
RS6172 |
Unspecified |
| scaffold1331 |
12177 |
12317 |
+ |
RS3381 |
Unspecified |
| scaffold1331 |
12538 |
12830 |
+ |
RS3449 |
Unspecified |
| scaffold1331 |
12921 |
13122 |
- |
RS3539 |
Unspecified |
| scaffold1331 |
12982 |
13144 |
+ |
RS10936 |
Unspecified |
| scaffold1331 |
13156 |
13181 |
+ |
(AGAAA)n |
Simple_repeat |
| scaffold1331 |
13429 |
14085 |
- |
RS3958 |
Unspecified |
| scaffold1331 |
13699 |
14321 |
- |
RS11622 |
Unspecified |
| scaffold1331 |
14339 |
14439 |
+ |
RS17835 |
Unspecified |
| scaffold1331 |
16453 |
16564 |
+ |
RS3584 |
Unspecified |
| scaffold1331 |
16573 |
16809 |
+ |
RS2357 |
Unspecified |
| scaffold1331 |
17978 |
18071 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1331 |
19206 |
19573 |
- |
RS7110 |
Unspecified |
| scaffold1331 |
19600 |
19721 |
- |
RS8519 |
Unspecified |
| scaffold1331 |
20499 |
20538 |
+ |
(GTTAAAGT)n |
Simple_repeat |
| scaffold1331 |
20652 |
20686 |
+ |
G-rich |
Low_complexity |
| scaffold1331 |
21069 |
21096 |
+ |
(AAC)n |
Simple_repeat |
| scaffold1331 |
21418 |
21744 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1331 |
22420 |
22715 |
+ |
RS11001 |
Unspecified |
| scaffold1331 |
22964 |
23139 |
- |
RS8450 |
Unspecified |
| scaffold1331 |
23400 |
23696 |
+ |
RS5273 |
Unspecified |
| scaffold1331 |
23804 |
23831 |
+ |
(GAT)n |
Simple_repeat |
| scaffold1331 |
23949 |
24067 |
+ |
RS8450 |
Unspecified |
| scaffold1331 |
24150 |
24216 |
+ |
RS79 |
Unspecified |
| scaffold1331 |
24217 |
24362 |
- |
RS11083 |
Unspecified |
| scaffold1331 |
24373 |
24441 |
+ |
RS639 |
Unspecified |
| scaffold1331 |
24474 |
24504 |
+ |
(TA)n |
Simple_repeat |
| scaffold1331 |
26391 |
26425 |
+ |
RS79 |
Unspecified |
| scaffold1331 |
26695 |
26760 |
+ |
G-rich |
Low_complexity |
| scaffold1331 |
26948 |
26988 |
+ |
(ATTTCA)n |
Simple_repeat |
| scaffold1331 |
27415 |
27566 |
+ |
RS4392 |
Unspecified |
| scaffold1331 |
27718 |
27741 |
+ |
(A)n |
Simple_repeat |
| scaffold1331 |
27857 |
28361 |
+ |
RS1152 |
Unspecified |
| scaffold1331 |
28291 |
28781 |
+ |
RS831 |
Unspecified |
| scaffold1331 |
29284 |
29341 |
- |
Gypsy-13_SMo-LTR |
LTR/Gypsy |
| scaffold1331 |
29815 |
29888 |
- |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold1331 |
30250 |
30338 |
+ |
(TCA)n |
Simple_repeat |
| scaffold1331 |
30504 |
30712 |
+ |
A-rich |
Low_complexity |
| scaffold1331 |
30881 |
30925 |
+ |
(T)n |
Simple_repeat |
| scaffold1331 |
31023 |
31191 |
+ |
RS11038 |
Unspecified |
| scaffold1331 |
31241 |
31306 |
+ |
RS1669 |
Unspecified |
| scaffold1331 |
31329 |
32562 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold1331 |
32552 |
32726 |
+ |
RS11038 |
Unspecified |
| scaffold1331 |
33107 |
33685 |
+ |
ltr_Roo |
ltr_Roo(TransposonPSI) |
| scaffold1331 |
33295 |
33477 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold1331 |
33733 |
35091 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold1331 |
34702 |
35221 |
- |
Copia-77_SB-I |
LTR/Copia |
| scaffold1331 |
35261 |
35717 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold1331 |
35721 |
35889 |
- |
RS7802 |
Unspecified |
| scaffold1331 |
35959 |
36091 |
+ |
RS1669 |
Unspecified |
| scaffold1331 |
36114 |
37347 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold1331 |
37337 |
37511 |
+ |
RS11038 |
Unspecified |
| scaffold1331 |
37644 |
37682 |
+ |
(A)n |
Simple_repeat |
| scaffold1331 |
37698 |
37753 |
+ |
(TGTTAA)n |
Simple_repeat |
| scaffold1331 |
37879 |
38023 |
+ |
RS718 |
Unspecified |
| scaffold1331 |
38028 |
38243 |
- |
RS2543 |
Unspecified |
| scaffold1331 |
39048 |
39195 |
- |
PL261 |
Unspecified |
| scaffold1331 |
39068 |
39237 |
- |
RS1400 |
Unspecified |
| scaffold1331 |
39152 |
39256 |
- |
RS2854 |
Unspecified |
| scaffold1331 |
39345 |
39372 |
+ |
(T)n |
Simple_repeat |
| scaffold1331 |
39934 |
40038 |
+ |
RS2854 |
Unspecified |
| scaffold1331 |
39953 |
40122 |
+ |
RS1400 |
Unspecified |
| scaffold1331 |
40396 |
40527 |
- |
RS4942 |
Unspecified |
| scaffold1331 |
40728 |
40881 |
- |
RS3736 |
Unspecified |
| scaffold1331 |
40938 |
41312 |
- |
RS6172 |
Unspecified |
| scaffold1331 |
41331 |
41545 |
- |
RS10 |
Unspecified |
| scaffold1331 |
43094 |
43239 |
+ |
RS932 |
Unspecified |
| scaffold1331 |
43247 |
43291 |
- |
PL278 |
Unspecified |
| scaffold1331 |
43286 |
44119 |
+ |
RS2140 |
Unspecified |
| scaffold1331 |
44097 |
44224 |
- |
RS13542 |
Unspecified |
| scaffold1331 |
44240 |
44300 |
+ |
A-rich |
Low_complexity |
| scaffold1331 |
44522 |
44565 |
+ |
GA-rich |
Low_complexity |
| scaffold1331 |
44594 |
44627 |
+ |
(A)n |
Simple_repeat |
| scaffold1331 |
44722 |
44782 |
+ |
A-rich |
Low_complexity |
| scaffold1331 |
44986 |
45513 |
+ |
RS696 |
Unspecified |
| scaffold1331 |
45517 |
45665 |
+ |
RS3381 |
Unspecified |
| scaffold1331 |
45875 |
46166 |
+ |
RS3449 |
Unspecified |
| scaffold1331 |
46302 |
46363 |
- |
RS3846 |
Unspecified |
| scaffold1331 |
46497 |
46713 |
- |
RS2730 |
Unspecified |
| scaffold1331 |
46621 |
46939 |
- |
RS3495 |
Unspecified |
| scaffold1331 |
46747 |
47010 |
- |
RS3539 |
Unspecified |
| scaffold1331 |
46878 |
47031 |
+ |
RS10936 |
Unspecified |
| scaffold1331 |
47302 |
47920 |
- |
RS3958 |
Unspecified |
| scaffold1331 |
47575 |
48174 |
- |
RS11622 |
Unspecified |
| scaffold1331 |
48192 |
48257 |
+ |
RS17835 |
Unspecified |
| scaffold1331 |
48352 |
48450 |
- |
RS458 |
Unspecified |
| scaffold1331 |
48451 |
48692 |
- |
RS1663 |
Unspecified |
| scaffold1331 |
48709 |
48721 |
+ |
A-rich |
Low_complexity |
| scaffold1331 |
48722 |
48745 |
+ |
(A)n |
Simple_repeat |
| scaffold1331 |
50592 |
50787 |
- |
PL712 |
Unspecified |
| scaffold1331 |
50980 |
51094 |
+ |
RS8072 |
Unspecified |
| scaffold1331 |
51210 |
51363 |
+ |
A-rich |
Low_complexity |
| scaffold1331 |
51210 |
51264 |
+ |
A-rich |
Low_complexity |
| scaffold1331 |
51240 |
51363 |
- |
RS2764 |
Unspecified |
| scaffold1331 |
51266 |
51365 |
- |
RS3769 |
Unspecified |
| scaffold1331 |
51436 |
51508 |
+ |
(TATATATT)n |
Simple_repeat |
| scaffold1331 |
51897 |
52056 |
+ |
(TAC)n |
Simple_repeat |
| scaffold1331 |
52022 |
52056 |
+ |
(TAC)n |
Simple_repeat |
| scaffold1331 |
52107 |
52128 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1331 |
53315 |
53449 |
- |
RS8205 |
Unspecified |
| scaffold1331 |
53655 |
53832 |
- |
RS8223 |
Unspecified |
| scaffold1331 |
54865 |
54938 |
- |
RS11622 |
Unspecified |
| scaffold1331 |
54937 |
55016 |
+ |
RS13324 |
Unspecified |
| scaffold1331 |
55015 |
55053 |
- |
RS11622 |
Unspecified |
| scaffold1331 |
55052 |
55262 |
- |
RS1705 |
Unspecified |
| scaffold1331 |
55264 |
55579 |
+ |
RS210 |
Unspecified |
| scaffold1331 |
55577 |
55617 |
- |
RS1705 |
Unspecified |
| scaffold1331 |
55842 |
55866 |
+ |
(TC)n |
Simple_repeat |
| scaffold1331 |
55867 |
55883 |
+ |
(AT)n |
Simple_repeat |
| scaffold1331 |
55981 |
56014 |
+ |
(A)n |
Simple_repeat |
| scaffold1331 |
56357 |
56397 |
+ |
(T)n |
Simple_repeat |
| scaffold1331 |
56909 |
56999 |
+ |
RS4962 |
Unspecified |
| scaffold1331 |
57146 |
57236 |
+ |
RS4962 |
Unspecified |
| scaffold1331 |
57805 |
58022 |
+ |
RS914 |
Unspecified |
| scaffold1331 |
58053 |
58372 |
- |
RS607 |
Unspecified |
| scaffold1331 |
58168 |
58397 |
- |
RS2329 |
Unspecified |
| scaffold1331 |
58834 |
59079 |
- |
RS8207 |
Unspecified |
| scaffold1331 |
59207 |
59265 |
+ |
A-rich |
Low_complexity |
| scaffold1331 |
59357 |
59399 |
+ |
A-rich |
Low_complexity |
| scaffold1331 |
59463 |
59564 |
+ |
RS2399 |
Unspecified |
| scaffold1331 |
60085 |
60123 |
+ |
(T)n |
Simple_repeat |
| scaffold1331 |
60135 |
60170 |
+ |
(T)n |
Simple_repeat |
| scaffold1331 |
71427 |
71772 |
+ |
PL866 |
Unspecified |